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contig_metadata

12 rows where bioproject = "PRJNA532380" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA532380 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1779476 1779476 PRJNA532380_P_NODE_3502_length_556_cov_2.118343_g3184_i0 PRJNA532380 3502 556 2.118343 11.77798708 Gregarina cloptoni 650276 SAR_Eukaryotes SAR_Eukaryotes 99 6.93e-16   NTclustered gi|241739988|gb|FJ459742.1| 650276 g3184 i0 95.161 11.660071942446 62 3 11 0 27 88 956 895 Gregarina cloptoni small subunit ribosomal RNA gene, partial sequence blastn 6483 99 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina cloptoni
27077600 27077600 PRJNA532380_P_NODE_33142_length_162_cov_0.920354_g32817_i0 PRJNA532380 33142 162 0.920354 1.49097348 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00105   NR XP_001017129.3 312017 g32817 i0 70.3 0.685185185185185 37 11 68.5 0 162 52 119 155 XP_001017129.3 EF hand protein [Tetrahymena thermophila SB210] diamond 111 45.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28324285 28324285 PRJNA532380_P_NODE_28266_length_168_cov_0.873950_g27941_i0 PRJNA532380 28266 168 0.87395 1.468236 Naviculaceae 67474 SAR_Eukaryotes SAR_Eukaryotes 52.4 5.43e-7   NR CAB9511201.1 568900 g27941 i0 85.4 1.71428571428571 48 7 85.7 0 163 20 48 95 CAB9511201.1 ubiquitin [Seminavis robusta] diamond 288 52.4 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
28941006 28941006 PRJNA532380_P_NODE_33588_length_162_cov_0.920354_g33263_i0 PRJNA532380 33588 162 0.920354 1.49097348 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 89 5.39e-19   NR TNV81950.1 5974 g33263 i0 71.2 0.962962962962963 52 15 96.3 0 3 158 395 446 TNV81950.1 hypothetical protein FGO68_gene5546 [Halteria grandinella] diamond 156 89 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
29035707 29035707 PRJNA532380_P_NODE_29448_length_167_cov_0.881356_g29123_i0 PRJNA532380 29448 167 0.881356 1.47186452 Cafeteria roenbergensis 33653 SAR_Eukaryotes SAR_Eukaryotes 66.2 5.49e-11   NR KAA0161520.1 33653 g29123 i0 84.8 0.592814371257485 33 5 59.3 0 1 99 295 327 KAA0161520.1 hypothetical protein FNF31_03803 [Cafeteria roenbergensis] diamond 99 66.2 1 Eukaryota Sar     Bigyra Bicosoecida Cafeteriaceae Cafeteria Cafeteria roenbergensis
29351347 29351347 PRJNA532380_P_NODE_27389_length_169_cov_0.866667_g27064_i0 PRJNA532380 27389 169 0.866667 1.46466723 Karlodinium veneficum 407301 SAR_Eukaryotes SAR_Eukaryotes 101 4.01e-24   NR ABV22229.1 407301 g27064 i0 87.3 2.96449704142012 55 7 97.6 0 1 165 123 177 ABV22229.1 ATP/ADP translocator [Karlodinium veneficum] diamond 501 101 1 Eukaryota Sar     Dinophyceae Gymnodiniales Kareniaceae Karlodinium Karlodinium veneficum
29382891 29382891 PRJNA532380_P_NODE_27829_length_169_cov_0.866667_g27504_i0 PRJNA532380 27829 169 0.866667 1.46466723 Vitrella brassicaformis 1169539 SAR_Eukaryotes SAR_Eukaryotes 75.1 4.46e-14   NR AND95666.1 1169539 g27504 i0 65.3 0.869822485207101 49 17 87 0 167 21 122 170 AND95666.1 Alanine-glyoxylate aminotransferase [Vitrella brassicaformis] diamond 147 75.1 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
29445769 29445769 PRJNA532380_P_NODE_28810_length_167_cov_1.762712_g28485_i0 PRJNA532380 28810 167 1.762712 2.94372904 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00521   NR CAE8612162.1 89957 g28485 i0 39.2 9.75449101796407 51 31 91.6 0 158 6 185 235 CAE8612162.1 unnamed protein product [Polarella glacialis] diamond 1629 43.9 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
30014508 30014508 PRJNA532380_P_NODE_28591_length_168_cov_0.873950_g28266_i0 PRJNA532380 28591 168 0.87395 1.468236 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.02e-15   NR TNV73304.1 5974 g28266 i0 53.6 1 56 26 100 0 168 1 43 98 TNV73304.1 hypothetical protein FGO68_gene16622 [Halteria grandinella] diamond 168 78.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
31103596 31103596 PRJNA532380_P_NODE_32595_length_163_cov_0.912281_g32270_i0 PRJNA532380 32595 163 0.912281 1.48701803 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 55.1 1.58e-7   NR CAD8116103.1 5886 g32270 i0 56.4 2.13496932515337 39 17 71.8 0 47 163 16 54 CAD8116103.1 unnamed protein product [Paramecium primaurelia] diamond 348 55.5 0.992792792792793 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
32764173 32764173 PRJNA532380_P_NODE_27720_length_169_cov_0.866667_g27395_i0 PRJNA532380 27720 169 0.866667 1.46466723 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 53.5 2.07e-6   NR CDW71884.1 5949 g27395 i0 42.9 0.869822485207101 49 28 87 0 15 161 153 201 CDW71884.1 cop9 signalosome complex subunit 7b [Stylonychia lemnae] diamond 147 53.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32827238 32827238 PRJNA532380_P_NODE_22320_length_190_cov_1.106383_g21995_i0 PRJNA532380 22320 190 1.106383 2.1021277 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 59.3 2.53e-8   NR OQR97283.1 74557 g21995 i0 40.3 0.978947368421053 62 37 97.9 0 3 188 324 385 OQR97283.1 phosphoacetylglucosamine mutase [Thraustotheca clavata] diamond 186 59.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;