RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA532380" and tax_clade = "PVC group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA532380 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31183141 31183141 PRJNA532380_P_NODE_26955_length_170_cov_1.289256_g26630_i0 PRJNA532380 26955 170 1.289256 2.1917352 Chlamydiia bacterium 2052156 Bacteria Bacteria 58.2 3.2e-8   NR MCB1113000.1 2052156 g26630 i0 44.6 2.94705882352941 56 31 98.8 0 169 2 188 243 MCB1113000.1 adenylate kinase [Chlamydiia bacterium] diamond 501 58.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
31752629 31752629 PRJNA532380_P_NODE_28497_length_168_cov_0.873950_g28172_i0 PRJNA532380 28497 168 0.87395 1.468236 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.3 0.00131   NR TAJ02153.1 2026780 g28172 i0 37.3 0.910714285714286 51 32 91.1 0 1 153 22 72 TAJ02153.1 MAG: (2Fe-2S) ferredoxin domain-containing protein [Planctomycetota bacterium] diamond 153 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;