RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA529924" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529924 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3054237 3054237 PRJNA529924_P_NODE_2323_length_314_cov_4.547368_g2149_i0 PRJNA529924 2323 314 4.547368 14.27873552 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 159 1.68e-34   NTclustered gi|1116517974|gb|AY485340.2| 6183 g2149 i0 90.756 46.8821656050955 119 11 38 0 196 314 227 109 Schistosoma mansoni ubiquitin mRNA, partial cds blastn 14721 159 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
4330214 4330214 PRJNA529924_P_NODE_604_length_814_cov_3.510828_g484_i0 PRJNA529924 604 814 3.510828 28.57813992 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 1201 0   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g484 i0 98.957 21.1830466830467 671 7 82 0 144 814 1 671 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 17243 1201 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
11981972 11981972 PRJNA529924_P_NODE_2230_length_325_cov_4.692568_g2056_i0 PRJNA529924 2230 325 4.692568 15.250846 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 159 1.75e-34   NTclustered gi|1116517974|gb|AY485340.2| 6183 g2056 i0 90.756 45.2953846153846 119 11 37 0 1 119 109 227 Schistosoma mansoni ubiquitin mRNA, partial cds blastn 14721 159 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
17080574 17080574 PRJNA529924_P_NODE_4714_length_164_cov_1.444444_g4540_i0 PRJNA529924 4714 164 1.444444 2.36888816 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 56.5 0.001   NTclustered gi|56759117|gb|AY815967.1| 6182 g4540 i0 94.444 0.219512195121951 36 2 22 0 129 164 821 786 Schistosoma japonicum SJCHGC02224 protein mRNA, complete cds blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23455426 23455426 PRJNA529924_P_NODE_4839_length_158_cov_2.093023_g4665_i0 PRJNA529924 4839 158 2.093023 3.30697634 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 121 3.5299999999999995e-23   NTclustered gi|2318754094|ref|XM_051212442.1| 6185 g4665 i0 81.046 61.7215189873418 153 27 96 2 3 154 353 202 Schistosoma haematobium uncharacterized protein (MS3_00004515), mRNA blastn 9752 121 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
30850918 30850918 PRJNA529924_P_NODE_3894_length_198_cov_2.213018_g3720_i0 PRJNA529924 3894 198 2.213018 4.38177564 Metazoa 33208 Platyhelminthes Platyhelminthes 51.6 1.26e-5   NR CAI2735247.1 6189 g3720 i0 77.4 1.03030303030303 31 5 47 1 154 62 1 29 CAI2735247.1 unnamed protein product [Schistosoma spindalis] diamond 204 51.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma spindalis
32005862 32005862 PRJNA529924_P_NODE_2138_length_336_cov_5.664495_g1964_i0 PRJNA529924 2138 336 5.664495 19.0327032 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 94 7.85e-23   NR PAA52392.1 282301 g1964 i0 84 2.78571428571429 50 8 44.6 0 47 196 1 50 PAA52392.1 hypothetical protein BOX15_Mlig007628g1 [Macrostomum lignano] diamond 936 94 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;