RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA529924" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529924 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6880908 6880908 PRJNA529924_P_NODE_3406_length_221_cov_2.078125_g3232_i0 PRJNA529924 3406 221 2.078125 4.59265625 Montipora capricornis 246305 Cnidaria other_Eukaryota 163 8.67e-36   NTclustered gi|2812100668|ref|XM_068886342.1| 246305 g3232 i0 86.577 36.6606334841629 149 18 67 2 1 148 290 143 PREDICTED: Montipora capricornis tubulin alpha-1 chain-like (LOC138040657), mRNA blastn 8102 163 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
17080577 17080577 PRJNA529924_P_NODE_5014_length_151_cov_1.606557_g4840_i0 PRJNA529924 5014 151 1.606557 2.42590107 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 95.3 2.02e-15   NTclustered gi|1603798923|ref|XM_028547489.1| 151771 g4840 i0 81.982 0.735099337748344 111 20 74 0 40 150 1075 965 PREDICTED: Dendronephthya gigantea T-complex protein 1 subunit eta-like (LOC114526009), mRNA blastn 111 95.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
18354667 18354667 PRJNA529924_P_NODE_4515_length_173_cov_2.416667_g4341_i0 PRJNA529924 4515 173 2.416667 4.18083391 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 71.3 4.01e-8   NTclustered gi|1619670980|ref|XM_021053323.2| 2652724 g4341 i0 89.286 0.543352601156069 56 6 32 0 109 164 647 592 PREDICTED: Exaiptasia diaphana anther-specific proline-rich protein APG (LOC110246940), mRNA blastn 94 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
19629242 19629242 PRJNA529924_P_NODE_2096_length_343_cov_5.716561_g1922_i0 PRJNA529924 2096 343 5.716561 19.60780423 Podocoryna carnea 6096 Cnidaria other_Eukaryota 213 1.41e-50   NTclustered gi|396251|emb|X71384.1| 6096 g1922 i0 79.048 5.69096209912536 315 62 91 4 1 313 191 503 P.carnea mRNA for 40S ribosomal protein S14 blastn 1952 213 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Podocoryna Podocoryna carnea
19629253 19629253 PRJNA529924_P_NODE_4616_length_168_cov_2.517986_g4442_i0 PRJNA529924 4616 168 2.517986 4.23021648 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 121 3.8099999999999996e-23   NTclustered gi|1524874693|ref|XM_027189009.1| 46731 g4442 i0 90.323 9.18452380952381 93 7 55 2 36 127 1276 1185 PREDICTED: Pocillopora damicornis protein disulfide-isomerase A3-like (LOC113672683), mRNA blastn 1543 121 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
21519276 21519276 PRJNA529924_P_NODE_2337_length_312_cov_5.932862_g2163_i0 PRJNA529924 2337 312 5.932862 18.51052944 Metazoa 33208 Cnidaria other_Eukaryota 300 9.44e-77   NTclustered gi|2782899435|ref|XM_067068137.1| 252671 g2163 i0 83.974 169.586538461538 312 50 100 0 1 312 764 453 PREDICTED: Clytia hemisphaerica polyubiquitin-B (LOC136811514), mRNA blastn 52911 300 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
22179927 22179927 PRJNA529924_P_NODE_3058_length_246_cov_2.516129_g2884_i0 PRJNA529924 3058 246 2.516129 6.18967734 Metazoa 33208 Cnidaria other_Eukaryota 141 4.26e-40   NR XP_029194826.1 45264 g2884 i0 83.8 27.3292682926829 80 12 97.6 1 241 2 85 163 XP_029194826.1 peptidyl-prolyl cis-trans isomerase B-like [Acropora millepora] diamond 6723 142 0.992957746478873 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;