RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA529241" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529241 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11980157 11980157 PRJNA529241_P_NODE_478450_length_151_cov_7.280702_g476128_i0 PRJNA529241 478450 151 7.280702 10.99386002 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 54.7 0.003   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g476128 i0 87.755 0.324503311258278 49 2 32 4 4 51 4186209 4186254 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 49 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30393872 30393872 PRJNA529241_P_NODE_304053_length_173_cov_3.470588_g301731_i0 PRJNA529241 304053 173 3.470588 6.00411724 Latescibacteria bacterium DG_63 1703781 Bacteria Bacteria 42.7 0.0143   NR KPJ59996.1 1703781 g301731 i0 72 0.433526011560694 25 7 43.4 0 172 98 261 285 KPJ59996.1 MAG: hypothetical protein AMJ46_08640 [Latescibacteria bacterium DG_63] diamond 75 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Latescibacteria bacterium DG_63

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;