RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA529241" and tax_phylum = "Candidatus Glassiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Glassiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA529241 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27519915 27519915 PRJNA529241_P_NODE_91723_length_225_cov_9.686170_g89401_i0 PRJNA529241 91723 225 9.68617 21.7938825 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 89 1.79e-19   NR HUU89255.1 2602803 g89401 i0 47.5 2.69333333333333 101 26 98.7 2 223 2 128 228 HUU89255.1 nucleotidyltransferase domain-containing protein [Candidatus Glassbacteria bacterium] diamond 606 89 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
28782567 28782567 PRJNA529241_P_NODE_144107_length_188_cov_9.066225_g141785_i0 PRJNA529241 144107 188 9.066225 17.044503 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 50.8 3.5e-6   NR HUU87851.1 2602803 g141785 i0 41.8 1.75531914893617 55 23 73.4 1 188 51 49 103 HUU87851.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 330 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
31436273 31436273 PRJNA529241_P_NODE_384276_length_173_cov_2.514706_g381954_i0 PRJNA529241 384276 173 2.514706 4.35044138 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 42.4 0.00579   NR HUU87851.1 2602803 g381954 i0 65.2 0.398843930635838 23 8 39.9 0 167 99 27 49 HUU87851.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 69 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;