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contig_metadata

20 rows where bioproject = "PRJNA529241", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 20 ✖

tax_phylum 1

  • Armatimonadota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA529241 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13255166 13255166 PRJNA529241_P_NODE_468831_length_152_cov_1.243478_g466509_i0 PRJNA529241 468831 152 1.243478 1.89008656 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 189 9.08e-44   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g466509 i0 89.404 137.414473684211 151 15 99 1 2 152 1878923 1879072 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 20887 189 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
18350847 18350847 PRJNA529241_P_NODE_225635_length_173_cov_5.117647_g223313_i0 PRJNA529241 225635 173 5.117647 8.85352931 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.8 0.015   NTclustered gi|2108374973|gb|CP070648.1| 2033014 g223313 i0 100 0.161849710982659 28 0 16 0 130 157 4706665 4706638 MAG: Armatimonadetes bacterium isolate bin88 chromosome blastn 28 52.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
22177314 22177314 PRJNA529241_P_NODE_397318_length_173_cov_1.058824_g394996_i0 PRJNA529241 397318 173 1.058824 1.83176552 Armatimonadota bacterium 2033014 Bacteria Bacteria 222 1.05e-53   NTclustered gi|2621703062|emb|OY760504.1| 2033014 g394996 i0 90.533 419.115606936416 169 14 97 2 6 173 2411145 2410978 MAG: Armatimonadota bacterium isolate be0b92b7-bbec-405b-9e81-a5dbe9f1ff7a genome assembly, chromosome: 1 blastn 72507 222 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26697572 26697572 PRJNA529241_P_NODE_482261_length_151_cov_6.666667_g479939_i0 PRJNA529241 482261 151 6.666667 10.06666717 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 99 5.319999999999999e-23   NR MCX7687571.1 2682145 g479939 i0 98 0.993377483443709 50 0 97.4 1 3 149 190 239 MCX7687571.1 hypothetical protein [Fimbriimonadales bacterium] diamond 150 99 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27235575 27235575 PRJNA529241_P_NODE_548903_length_151_cov_2.877193_g546581_i0 PRJNA529241 548903 151 2.877193 4.34456143 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 67.4 1.81e-11   NR HTQ09850.1 2682144 g546581 i0 47.8 1.82781456953642 92 5 97.4 1 5 151 54 145 HTQ09850.1 P-type DNA transfer ATPase VirB11 [Fimbriimonadaceae bacterium] diamond 276 67.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27425357 27425357 PRJNA529241_P_NODE_389303_length_173_cov_2.433824_g386981_i0 PRJNA529241 389303 173 2.433824 4.21051552 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 51.2 1.47e-5   NR MBX7134344.1 2682144 g386981 i0 87.5 0.416184971098266 24 3 41.6 0 168 97 96 119 MBX7134344.1 ATP-binding protein [Fimbriimonadaceae bacterium] diamond 72 51.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27709702 27709702 PRJNA529241_P_NODE_190584_length_173_cov_6.948529_g188262_i0 PRJNA529241 190584 173 6.948529 12.02095517 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 54.3 1.23e-7   NR GIV13035.1 2682145 g188262 i0 100 0.416184971098266 24 0 41.6 0 74 3 19 42 GIV13035.1 MAG: hypothetical protein KatS3mg021_1317 [Fimbriimonadales bacterium] diamond 72 54.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27850592 27850592 PRJNA529241_P_NODE_347564_length_173_cov_2.882353_g345242_i0 PRJNA529241 347564 173 2.882353 4.98647069 Bacteria 2 Bacteria Bacteria 54.7 8.7e-7   NR OLD46484.1 1805024 g345242 i0 100 4.33526011560694 25 0 43.4 0 173 99 34 58 OLD46484.1 MAG: hypothetical protein AUI83_15115 [Armatimonadetes bacterium 13_1_40CM_3_65_7] diamond 750 54.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium 13_1_40CM_3_65_7
28751198 28751198 PRJNA529241_P_NODE_337547_length_173_cov_3.058824_g335225_i0 PRJNA529241 337547 173 3.058824 5.29176552 Armatimonadota bacterium 2033014 Bacteria Bacteria 76.6 1.17e-14   NR MBM3457300.1 2033014 g335225 i0 66.7 1.94219653179191 57 13 98.8 1 172 2 128 178 MBM3457300.1 IS630 family transposase [Armatimonadota bacterium] diamond 336 76.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29287930 29287930 PRJNA529241_P_NODE_563709_length_150_cov_5.672566_g561387_i0 PRJNA529241 563709 150 5.672566 8.508849 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 54.3 8.4e-7   NR HRF59254.1 2682144 g561387 i0 58.8 1.02 51 15 90 1 143 9 164 214 HRF59254.1 cobalamin-independent methionine synthase II family protein [Fimbriimonadaceae bacterium] diamond 153 54.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29603347 29603347 PRJNA529241_P_NODE_252630_length_173_cov_4.367647_g250308_i0 PRJNA529241 252630 173 4.367647 7.5560293100000004 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 46.6 6.32e-4   NR WP_025227707.1 1005039 g250308 i0 84 0.433526011560694 25 4 43.4 0 99 173 391 415 WP_025227707.1 glutamate--tRNA ligase [Fimbriimonas ginsengisoli] diamond 75 46.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
30582753 30582753 PRJNA529241_P_NODE_232453_length_173_cov_4.897059_g230131_i0 PRJNA529241 232453 173 4.897059 8.47191207 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 45.8 0.00117   NR WP_052547575.1 1005039 g230131 i0 69.6 1.23121387283237 23 7 39.9 0 75 7 357 379 WP_052547575.1 helix-turn-helix domain-containing protein [Fimbriimonas ginsengisoli] diamond 213 45.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
30772781 30772781 PRJNA529241_P_NODE_528634_length_151_cov_3.640351_g526312_i0 PRJNA529241 528634 151 3.640351 5.49693001 Armatimonadota bacterium 2033014 Bacteria Bacteria 54.3 8.44e-7   NR MCL6531706.1 2033014 g526312 i0 100 0.496688741721854 25 0 49.7 0 76 2 10 34 MCL6531706.1 electron transfer flavoprotein subunit alpha/FixB family protein [Armatimonadota bacterium] diamond 75 54.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30993783 30993783 PRJNA529241_P_NODE_22534_length_450_cov_5.305085_g20271_i0 PRJNA529241 22534 450 5.305085 23.8728825 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 51.2 3.89e-4   NR GIV03844.1 2682145 g20271 i0 50 0.346666666666667 52 26 34.7 0 183 28 1351 1402 GIV03844.1 MAG: hypothetical protein KatS3mg015_2674 [Fimbriimonadales bacterium] diamond 156 51.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31515016 31515016 PRJNA529241_P_NODE_341196_length_173_cov_3.007353_g338874_i0 PRJNA529241 341196 173 3.007353 5.20272069 Bacteria 2 Bacteria Bacteria 92 6.21e-20   NR CUU10825.1 1661580 g338874 i0 75 2.21965317919075 64 9 98.8 1 3 173 247 310 CUU10825.1 hypothetical protein GBSOP10_108112, partial [Armatimonadetes bacterium GBS] diamond 384 92 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GBS
31862509 31862509 PRJNA529241_P_NODE_539237_length_151_cov_3.236842_g536915_i0 PRJNA529241 539237 151 3.236842 4.88763142 Bacillati 1783272 Bacteria Bacteria 74.7 5.66e-14   NR MBI3927009.1 2033014 g536915 i0 74.1 3.21854304635762 54 9 97.4 1 150 4 893 946 MBI3927009.1 efflux RND transporter permease subunit [Armatimonadota bacterium] diamond 486 75.1 0.994673768308922 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31974008 31974008 PRJNA529241_P_NODE_215158_length_173_cov_5.514706_g212836_i0 PRJNA529241 215158 173 5.514706 9.54044138 Armatimonadota bacterium 2033014 Bacteria Bacteria 55.8 3.28e-7   NR MDQ7850410.1 2033014 g212836 i0 62.2 0.780346820809249 45 15 74.6 1 130 2 41 85 MDQ7850410.1 helix-turn-helix domain-containing protein [Armatimonadota bacterium] diamond 135 55.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32005722 32005722 PRJNA529241_P_NODE_232918_length_173_cov_4.882353_g230596_i0 PRJNA529241 232918 173 4.882353 8.44647069 Armatimonadota bacterium 2033014 Bacteria Bacteria 55.8 3.44e-7   NR MCL6534256.1 2033014 g230596 i0 100 0.433526011560694 25 0 43.4 0 1 75 505 529 MCL6534256.1 hypothetical protein [Armatimonadota bacterium] diamond 75 55.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32259243 32259243 PRJNA529241_P_NODE_558178_length_150_cov_7.132743_g555856_i0 PRJNA529241 558178 150 7.132743 10.6991145 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 55.1 4.63e-7   NR HLV80127.1 2739509 g555856 i0 44.2 3.08 77 16 100 1 1 150 265 341 HLV80127.1 substrate-binding domain-containing protein [Chthonomonadaceae bacterium] diamond 462 55.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
32543829 32543829 PRJNA529241_P_NODE_370679_length_173_cov_2.661765_g368357_i0 PRJNA529241 370679 173 2.661765 4.60485345 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.4 5.7e-6   NR MBC8102816.1 2033014 g368357 i0 92 0.867052023121387 25 2 43.4 0 2 76 158 182 MBC8102816.1 aspartate aminotransferase family protein [Armatimonadota bacterium] diamond 150 52.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;