RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA529241", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA529241 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27629900 27629900 PRJNA529241_P_NODE_113284_length_207_cov_4.058824_g110962_i0 PRJNA529241 113284 207 4.058824 8.40176568 root 1 Root_unresolved Root_unresolved 52 1.3e-5   NR RLF44909.1 1906666 g110962 i0 88 1.08695652173913 25 3 36.2 0 207 133 154 178 RLF44909.1 MAG: hypothetical protein DRN17_03595 [Thermoplasmata archaeon] diamond 225 52 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29650020 29650020 PRJNA529241_P_NODE_179450_length_173_cov_9.286765_g177128_i0 PRJNA529241 179450 173 9.286765 16.06610345 root 1 Root_unresolved Root_unresolved 43.9 0.00571   NR MCX6652743.1 1906667 g177128 i0 79.2 2.42774566473988 24 5 41.6 0 76 5 8 31 MCX6652743.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Methanomassiliicoccales archaeon] diamond 420 44.3 0.99097065462754 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
30551336 30551336 PRJNA529241_P_NODE_546753_length_151_cov_2.991228_g544431_i0 PRJNA529241 546753 151 2.991228 4.51675428 Thermoplasmata archaeon 1906666 Archaea Archaea 48.9 1.43e-5   NR HLE45666.1 1906666 g544431 i0 80 0.496688741721854 25 5 49.7 0 8 82 84 108 HLE45666.1 acyltransferase [Thermoplasmata archaeon] diamond 75 48.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;