RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA529241", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA529241 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27345711 27345711 PRJNA529241_P_NODE_292423_length_173_cov_3.661765_g290101_i0 PRJNA529241 292423 173 3.661765 6.33485345 Bacteria candidate phyla 1783234 Bacteria Bacteria 43.1 0.0106   NR HWN13645.1 2052315 g290101 i0 78.3 1.66473988439306 23 5 39.9 0 70 2 36 58 HWN13645.1 amidohydrolase family protein [Candidatus Dormiibacterota bacterium] diamond 288 43.5 0.990804597701149 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27993546 27993546 PRJNA529241_P_NODE_320045_length_173_cov_3.257353_g317723_i0 PRJNA529241 320045 173 3.257353 5.63522069 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 40.8 0.0114   NR HEY4866519.1 2052315 g317723 i0 81 0.364161849710983 21 4 36.4 0 65 3 4 24 HEY4866519.1 ATPase domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 63 40.8 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31419798 31419798 PRJNA529241_P_NODE_315476_length_173_cov_3.316176_g313154_i0 PRJNA529241 315476 173 3.316176 5.73698448 Bacillati 1783272 Bacteria Bacteria 44.7 0.00301   NR HVC22269.1 2052315 g313154 i0 64 2.15028901734104 25 9 43.4 0 98 172 28 52 HVC22269.1 cystathionine gamma-synthase [Candidatus Dormiibacterota bacterium] diamond 372 45.1 0.991130820399113 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32810725 32810725 PRJNA529241_P_NODE_82380_length_236_cov_4.391960_g80058_i0 PRJNA529241 82380 236 4.39196 10.3650256 Bacillati 1783272 Bacteria Bacteria 81.6 6.74e-16   NR HSP09762.1 2052315 g80058 i0 77.1 5.55508474576271 48 11 61 0 91 234 390 437 HSP09762.1 ABC transporter ATP-binding protein [Candidatus Dormiibacterota bacterium] diamond 1311 81.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;