contig_metadata
8 rows where bioproject = "PRJNA529241" and tax_clade = "delta/epsilon subdivisions"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7494168 | 7494168 | PRJNA529241_P_NODE_448486_length_157_cov_2.233333_g446164_i0 | PRJNA529241 | 448486 | 157 | 2.233333 | 3.50633281 | root | 1 | Root_unresolved | Root_unresolved | 285 | 1.17e-72 | NTclustered | gi|118163120|gb|EF072655.1| | 34034 | g446164 | i0 | 99.363 | 99.9808917197452 | 157 | 1 | 100 | 0 | 1 | 157 | 569 | 725 | Uncultured delta proteobacterium clone GASP-WA2S2_C12 16S ribosomal RNA gene, partial sequence | blastn | 15697 | 285 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 9429733 | 9429733 | PRJNA529241_P_NODE_48628_length_293_cov_2.558594_g46306_i0 | PRJNA529241 | 48628 | 293 | 2.558594 | 7.49668042 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 416 | 8.359999999999998e-112 | NTclustered | gi|451917372|gb|KC451236.1| | 34034 | g46306 | i0 | 93.841 | 97.0136518771331 | 276 | 17 | 94 | 0 | 1 | 276 | 3 | 278 | Uncultured delta proteobacterium clone RLBp2829 16S ribosomal RNA gene, partial sequence | blastn | 28425 | 416 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 11319733 | 11319733 | PRJNA529241_P_NODE_66509_length_257_cov_55.754545_g64187_i0 | PRJNA529241 | 66509 | 257 | 55.754545 | 143.28918065 | Pseudomonadota | 1224 | Bacteria | Bacteria | 473 | 4.2099999999999996e-129 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g64187 | i0 | 100 | 105.789883268482 | 256 | 0 | 99 | 0 | 2 | 257 | 259 | 4 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 27188 | 475 | 0.995789473684211 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 15803227 | 15803227 | PRJNA529241_P_NODE_396253_length_173_cov_2.139706_g393931_i0 | PRJNA529241 | 396253 | 173 | 2.139706 | 3.70169138 | Dissulfurimicrobium hydrothermale | 1750598 | Bacteria | Bacteria | 84.2 | 5.15e-12 | NTclustered | gi|2190143862|gb|CP085041.1| | 1750598 | g393931 | i0 | 87.013 | 1.97109826589595 | 77 | 6 | 43 | 4 | 1 | 75 | 1867874 | 1867948 | Dissulfurimicrobium hydrothermale strain Sh68 chromosome, complete genome | blastn | 341 | 84.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Dissulfurimicrobium | Dissulfurimicrobium hydrothermale | |||||
| 20241963 | 20241963 | PRJNA529241_P_NODE_32236_length_363_cov_2.263804_g29921_i0 | PRJNA529241 | 32236 | 363 | 2.263804 | 8.21760852 | Dissulfurimicrobium | 1769732 | Bacteria | Bacteria | 392 | 1.7899999999999994e-104 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g29921 | i0 | 86.464 | 513.297520661157 | 362 | 43 | 99 | 6 | 1 | 359 | 5550 | 5192 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 186327 | 394 | 0.99492385786802 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 30488244 | 30488244 | PRJNA529241_P_NODE_368333_length_173_cov_2.683824_g366011_i0 | PRJNA529241 | 368333 | 173 | 2.683824 | 4.64301552 | SAR324 cluster bacterium | 2024889 | Bacteria | Bacteria | 58.5 | 3.85e-8 | NR | MBC8260029.1 | 2024889 | g366011 | i0 | 100 | 2.16763005780347 | 25 | 0 | 43.4 | 0 | 98 | 172 | 171 | 195 | MBC8260029.1 formate dehydrogenase subunit alpha [SAR324 cluster bacterium] | diamond | 375 | 58.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 31198084 | 31198084 | PRJNA529241_P_NODE_584095_length_150_cov_3.176991_g581773_i0 | PRJNA529241 | 584095 | 150 | 3.176991 | 4.7654865 | Bacteria | 2 | Bacteria | Bacteria | 43.9 | 0.00236 | NR | OIP32281.1 | 1805126 | g581773 | i0 | 62.1 | 3.68 | 29 | 11 | 58 | 0 | 57 | 143 | 35 | 63 | OIP32281.1 MAG: rRNA maturation RNase YbeY [Deltaproteobacteria bacterium CG2_30_63_29] | diamond | 552 | 43.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG2_30_63_29 | ||||||
| 31594770 | 31594770 | PRJNA529241_P_NODE_92536_length_225_cov_1.452128_g90214_i0 | PRJNA529241 | 92536 | 225 | 1.452128 | 3.267288 | Olavius algarvensis associated proteobacterium Delta 3 | 426688 | Bacteria | Bacteria | 43.5 | 0.0149 | NR | CAB5117701.1 | 426688 | g90214 | i0 | 42.3 | 0.693333333333333 | 52 | 30 | 69.3 | 0 | 203 | 48 | 6 | 57 | CAB5117701.1 S-adenosylmethionine decarboxylase proenzyme (EC, eukaryotic [Olavius algarvensis associated proteobacterium Delta 3] | diamond | 156 | 43.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Olavius algarvensis associated proteobacterium Delta 3 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;