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contig_metadata

9 rows where bioproject = "PRJNA529241", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA529241 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8767541 8767541 PRJNA529241_P_NODE_107067_length_212_cov_2.411429_g104745_i0 PRJNA529241 107067 212 2.411429 5.11222948 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 392 9.67e-105   NTclustered gi|1802599786|gb|MT001195.1| 41631 g104745 i0 100 100.047169811321 212 0 100 0 1 212 744 533 Colpoda sp. strain HFCC1289 small subunit ribosomal RNA gene, partial sequence blastn 21210 392 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11319787 11319787 PRJNA529241_P_NODE_74769_length_246_cov_1.459330_g72447_i0 PRJNA529241 74769 246 1.45933 3.5899518 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 449 6.74e-122   NTclustered gi|1802599789|gb|MT001198.1| 41631 g72447 i0 99.593 100.069105691057 246 1 100 0 1 246 72 317 Colpoda sp. strain HFCC1224 small subunit ribosomal RNA gene, partial sequence blastn 24617 449 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11980013 11980013 PRJNA529241_P_NODE_461370_length_153_cov_1.655172_g459048_i0 PRJNA529241 461370 153 1.655172 2.53241316 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 272 8.84e-69   NTclustered gi|10782|emb|X54004.1| 5908 g459048 i0 98.693 93.156862745098 153 2 100 0 1 153 1610 1762 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 14253 272 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
18350430 18350430 PRJNA529241_P_NODE_171475_length_176_cov_1.733813_g169153_i0 PRJNA529241 171475 176 1.733813 3.05151088 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 309 7.98e-80   NTclustered gi|2651357788|gb|PP174303.1| 41631 g169153 i0 98.295 99.5454545454545 176 3 100 0 1 176 2825 3000 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17520 309 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
20902880 20902880 PRJNA529241_P_NODE_407337_length_172_cov_1.644444_g405015_i0 PRJNA529241 407337 172 1.644444 2.82844368 Tetrahymena sp. FN-2012 1217406 SAR_Eukaryotes SAR_Eukaryotes 318 1.2899999999999999e-82   NTclustered gi|400269896|gb|JX271898.1| 1217406 g405015 i0 100 98.7732558139535 172 0 100 0 1 172 549 378 Tetrahymena sp. FN-2012 strain HFCC700 28S large subunit ribosomal RNA gene, partial sequence blastn 16989 318 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. FN-2012
28608549 28608549 PRJNA529241_P_NODE_300207_length_173_cov_3.536765_g297885_i0 PRJNA529241 300207 173 3.536765 6.11860345 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00117   NR OMJ86890.1 5963 g297885 i0 79.2 0.832369942196532 24 5 41.6 0 98 169 198 221 OMJ86890.1 hypothetical protein SteCoe_11529 [Stentor coeruleus] diamond 144 45.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
31942154 31942154 PRJNA529241_P_NODE_101197_length_217_cov_1.450000_g98875_i0 PRJNA529241 101197 217 1.45 3.1465 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.014   NR KAL4460608.1 2486642 g98875 i0 33.8 1.963133640553 71 45 95.4 1 216 10 60 130 KAL4460608.1 hypothetical protein ABPG72_004035 [Tetrahymena utriculariae] diamond 426 43.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
31942282 31942282 PRJNA529241_P_NODE_526157_length_151_cov_3.736842_g523835_i0 PRJNA529241 526157 151 3.736842 5.64263142 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 45.8 8.17e-4   NR CAI2377331.1 5936 g523835 i0 60 0.596026490066225 30 12 59.6 0 92 3 94 123 CAI2377331.1 unnamed protein product [Moneuplotes crassus] diamond 90 45.8 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
32400760 32400760 PRJNA529241_P_NODE_516619_length_151_cov_4.105263_g514297_i0 PRJNA529241 516619 151 4.105263 6.19894713 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 80.9 1.3e-16   NR XP_004034656.1 5932 g514297 i0 75.5 1.94701986754967 49 12 97.4 0 150 4 204 252 XP_004034656.1 hypothetical protein IMG5_116410 [Ichthyophthirius multifiliis] diamond 294 81.6 0.991421568627451 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;