RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA529241" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 5 ✖

bioproject 1

  • PRJNA529241 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26665697 26665697 PRJNA529241_P_NODE_38061_length_331_cov_6.493197_g35742_i0 PRJNA529241 38061 331 6.493197 21.49248207 Methanobacterium sp. 2164 Archaea Archaea 67.8 1.51e-12   NR MEN6292319.1 2164 g35742 i0 59.6 0.425981873111782 47 19 42.6 0 177 317 15 61 MEN6292319.1 hypothetical protein [Methanobacterium sp.] diamond 141 67.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
27709732 27709732 PRJNA529241_P_NODE_308904_length_173_cov_3.404412_g306582_i0 PRJNA529241 308904 173 3.404412 5.88963276 Methanobrevibacter woesei 190976 Archaea Archaea 45.8 0.00119   NR WP_276847257.1 190976 g306582 i0 84 0.433526011560694 25 4 43.4 0 75 1 38 62 WP_276847257.1 hypothetical protein [Methanobrevibacter woesei] diamond 75 45.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter woesei
27835483 27835483 PRJNA529241_P_NODE_46244_length_300_cov_3.391635_g43922_i0 PRJNA529241 46244 300 3.391635 10.174905 Methanobacterium sp. 2164 Archaea Archaea 65.5 6.81e-10   NR MEN6294228.1 2164 g43922 i0 65.9 0.41 41 14 41 0 299 177 220 260 MEN6294228.1 hypothetical protein [Methanobacterium sp.] diamond 123 65.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
29287860 29287860 PRJNA529241_P_NODE_30489_length_374_cov_5.255193_g28179_i0 PRJNA529241 30489 374 5.255193 19.65442182 Methanobacterium sp. 2164 Archaea Archaea 59.3 2.01e-7   NR MEN6292542.1 2164 g28179 i0 67.6 0.272727272727273 34 11 27.3 0 103 2 153 186 MEN6292542.1 hypothetical protein [Methanobacterium sp.] diamond 102 59.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30267371 30267371 PRJNA529241_P_NODE_351252_length_173_cov_2.845588_g348930_i0 PRJNA529241 351252 173 2.845588 4.92286724 Methanobacterium sp. 2164 Archaea Archaea 43.5 0.00702   NR MEN6292541.1 2164 g348930 i0 80 0.867052023121387 25 5 43.4 0 1 75 136 160 MEN6292541.1 hypothetical protein [Methanobacterium sp.] diamond 150 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;