RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA529241", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA529241 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29508913 29508913 PRJNA529241_P_NODE_33210_length_357_cov_4.284375_g30892_i0 PRJNA529241 33210 357 4.284375 15.29521875 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 47 0.00378   NR MFP4527409.1 2447898 g30892 i0 42.6 0.394957983193277 47 27 39.5 0 192 332 115 161 MFP4527409.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 141 47 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31088598 31088598 PRJNA529241_P_NODE_56275_length_275_cov_3.214286_g53953_i0 PRJNA529241 56275 275 3.214286 8.8392865 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 120 2.54e-29   NR MFA7325897.1 2447898 g53953 i0 67 0.992727272727273 91 27 98.2 2 274 5 635 723 MFA7325897.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 273 120 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31214466 31214466 PRJNA529241_P_NODE_244895_length_173_cov_4.551471_g242573_i0 PRJNA529241 244895 173 4.551471 7.87404483 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 47.8 2.48e-4   NR MCX6145898.1 2447898 g242573 i0 76 0.84971098265896 25 6 43.4 0 75 1 201 225 MCX6145898.1 cbb3-type cytochrome c oxidase subunit I [Candidatus Kapaibacterium sp.] diamond 147 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;