RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA529241", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA529241 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28135035 28135035 PRJNA529241_P_NODE_259625_length_173_cov_4.227941_g257303_i0 PRJNA529241 259625 173 4.227941 7.31433793 Bacteria 2 Bacteria Bacteria 48.1 1.79e-4   NR HRT22338.1 2030809 g257303 i0 100 0.867052023121387 25 0 43.4 0 1 75 234 258 HRT22338.1 DUF2213 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 150 48.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28814082 28814082 PRJNA529241_P_NODE_265588_length_173_cov_4.110294_g263266_i0 PRJNA529241 265588 173 4.110294 7.11080862 Candidatus Hydrogenedentales bacterium 3120109 Bacteria Bacteria 56.2 2.37e-7   NR MFA6244856.1 3120109 g263266 i0 50.9 1.95953757225434 57 21 98.8 1 171 1 217 266 MFA6244856.1 aldo/keto reductase [Candidatus Hydrogenedentales bacterium] diamond 339 56.2 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Hydrogenedentia Candidatus Hydrogenedentales     Candidatus Hydrogenedentales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;