RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA529241", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA529241 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27172023 27172023 PRJNA529241_P_NODE_162122_length_180_cov_2.650350_g159800_i0 PRJNA529241 162122 180 2.65035 4.77063 Rhodohalobacter sp. SW132 2293433 Bacteria Bacteria 59.7 9.88e-9   NR WP_116036959.1 2293433 g159800 i0 85.2 1.31666666666667 27 4 45 0 178 98 183 209 WP_116036959.1 diphthine--ammonia ligase [Rhodohalobacter sp. SW132] diamond 237 59.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Rhodohalobacter Rhodohalobacter sp. SW132
28182663 28182663 PRJNA529241_P_NODE_432966_length_163_cov_1.785714_g430644_i0 PRJNA529241 432966 163 1.785714 2.91071382 Balneolaceae bacterium 2053516 Bacteria Bacteria 56.6 1.54e-7   NR HKL14286.1 2053516 g430644 i0 59.5 3.3680981595092 42 17 77.3 0 36 161 10 51 HKL14286.1 hypothetical protein [Balneolaceae bacterium] diamond 549 56.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
29572100 29572100 PRJNA529241_P_NODE_81930_length_237_cov_1.080000_g79608_i0 PRJNA529241 81930 237 1.08 2.5596 Balneola sp. 2024824 Bacteria Bacteria 105 3.58e-25   NR HAW80236.1 2024824 g79608 i0 61 2.93670886075949 77 30 97.5 0 235 5 14 90 HAW80236.1 DNA polymerase [Balneola sp.] diamond 696 105 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;