contig_metadata
8 rows where bioproject = "PRJNA529224" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 498018 | 498018 | PRJNA529224_S_NODE_761_length_229_cov_6.725000_g754_i0 | PRJNA529224 | 761 | 229 | 6.725 | 15.40025 | Pirellula sp. SH-Sr6A | 1632865 | Bacteria | Bacteria | 424 | 3.76e-114 | NTclustered | gi|1015448679|gb|CP011272.1| | 1632865 | g754 | i0 | 100 | 86.3144104803494 | 229 | 0 | 100 | 0 | 1 | 229 | 3097108 | 3096880 | Pirellula sp. SH-Sr6A, complete genome | blastn | 19766 | 424 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. SH-Sr6A | |
| 4324919 | 4324919 | PRJNA529224_S_NODE_1804_length_156_cov_5.480315_g1797_i0 | PRJNA529224 | 1804 | 156 | 5.480315 | 8.5492914 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 233 | 4.2799999999999995e-57 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g1797 | i0 | 93.631 | 206.916666666667 | 157 | 9 | 100 | 1 | 1 | 156 | 1868738 | 1868582 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 32279 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 9426220 | 9426220 | PRJNA529224_S_NODE_1808_length_156_cov_4.527559_g1801_i0 | PRJNA529224 | 1808 | 156 | 4.527559 | 7.06299204 | Pirellula sp. SH-Sr6A | 1632865 | Bacteria | Bacteria | 289 | 9e-74 | NTclustered | gi|1015448679|gb|CP011272.1| | 1632865 | g1801 | i0 | 100 | 20.4230769230769 | 156 | 0 | 100 | 0 | 1 | 156 | 3096609 | 3096454 | Pirellula sp. SH-Sr6A, complete genome | blastn | 3186 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. SH-Sr6A | |
| 10702008 | 10702008 | PRJNA529224_S_NODE_49_length_540_cov_49.870841_g44_i0 | PRJNA529224 | 49 | 540 | 49.870841 | 269.3025414 | Saltatorellus ferox | 2528018 | Bacteria | Bacteria | 414 | 5.88e-111 | NTclustered | gi|1712682957|gb|CP036434.1| | 2528018 | g44 | i0 | 80.776 | 395.037037037037 | 541 | 95 | 99 | 8 | 4 | 540 | 2930713 | 2931248 | Planctomycetes bacterium Poly30 chromosome, complete genome | blastn | 213320 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Saltatorellus | Saltatorellus ferox | |||
| 13868266 | 13868266 | PRJNA529224_S_NODE_1131_length_196_cov_5.173653_g1124_i0 | PRJNA529224 | 1131 | 196 | 5.173653 | 10.14035988 | Planctomycetia | 203683 | Bacteria | Bacteria | 305 | 1.18e-78 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g1124 | i0 | 96.237 | 90.3571428571429 | 186 | 7 | 95 | 0 | 8 | 193 | 122783 | 122968 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 17710 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 15142603 | 15142603 | PRJNA529224_S_NODE_912_length_214_cov_8.081081_g905_i0 | PRJNA529224 | 912 | 214 | 8.081081 | 17.29351334 | Isosphaera | 127 | Bacteria | Bacteria | 263 | 8.000000000000002e-66 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g905 | i0 | 88.837 | 36.9626168224299 | 215 | 23 | 100 | 1 | 1 | 214 | 1320 | 1106 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 7910 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 19624006 | 19624006 | PRJNA529224_S_NODE_416_length_295_cov_14.150376_g409_i0 | PRJNA529224 | 416 | 295 | 14.150376 | 41.7436092 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 163 | 1.21e-35 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g409 | i0 | 84.706 | 39.0610169491525 | 170 | 18 | 56 | 7 | 1 | 165 | 1867830 | 1867664 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 11523 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 21516432 | 21516432 | PRJNA529224_S_NODE_1157_length_194_cov_6.642424_g1150_i0 | PRJNA529224 | 1157 | 194 | 6.642424 | 12.88630256 | Isosphaera | 127 | Bacteria | Bacteria | 246 | 7.159999999999999e-61 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g1150 | i0 | 90.811 | 118.840206185567 | 185 | 16 | 95 | 1 | 2 | 185 | 567 | 383 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 23055 | 246 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;