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contig_metadata

24 rows where bioproject = "PRJNA529224" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA529224 · 24 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1773182 1773182 PRJNA529224_S_NODE_82_length_478_cov_729.004454_g77_i0 PRJNA529224 82 478 729.004454 3484.64129012 Artemia franciscana 6661 Arthropoda Arthropoda 872 0   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g77 i0 99.789 42.6506276150628 475 1 99 0 3 477 3711 3237 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 20387 872 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
2389981 2389981 PRJNA529224_S_NODE_1342_length_182_cov_40.385621_g1335_i0 PRJNA529224 1342 182 40.385621 73.50183022 Artemia 6660 Arthropoda Arthropoda 329 6.39e-86   NTclustered gi|5835051|ref|NC_001620.1| 6661 g1335 i0 100 15.5054945054945 178 0 98 0 1 178 13823 14000 Artemia franciscana clone pMA-1 & pMA-3 mitochondrion, complete genome blastn 2822 329 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
3048988 3048988 PRJNA529224_S_NODE_223_length_364_cov_26.844776_g216_i0 PRJNA529224 223 364 26.844776 97.71498464 Artemia franciscana 6661 Arthropoda Arthropoda 662 0   NTclustered gi|5835051|ref|NC_001620.1| 6661 g216 i0 99.724 84.7472527472527 362 0 99 1 1 362 13486 13846 Artemia franciscana clone pMA-1 & pMA-3 mitochondrion, complete genome blastn 30848 662 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
3665716 3665716 PRJNA529224_S_NODE_1623_length_164_cov_8.955556_g1616_i0 PRJNA529224 1623 164 8.955556 14.68711184 Artemia 6660 Arthropoda Arthropoda 303 3.42e-78   NTclustered gi|288551058|gb|GU323293.1| 6661 g1616 i0 100 99.719512195122 164 0 100 0 1 164 481 644 Artemia franciscana isolate GNM 002 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 16354 303 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
6875668 6875668 PRJNA529224_S_NODE_1566_length_168_cov_59.021583_g1559_i0 PRJNA529224 1566 168 59.021583 99.15625944 Artemia franciscana 6661 Arthropoda Arthropoda 298 1.64e-76   NTclustered gi|2743030216|ref|XR_010619008.1| 6661 g1559 i0 99.39 88.0416666666667 164 1 98 0 3 166 164 1 PREDICTED: Artemia franciscana U1 spliceosomal RNA (LOC136033747), ncRNA blastn 14791 298 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
6875672 6875672 PRJNA529224_S_NODE_1706_length_160_cov_9.938931_g1699_i0 PRJNA529224 1706 160 9.938931 15.9022896 Artemia franciscana 6661 Arthropoda Arthropoda 296 5.55e-76   NTclustered gi|288551058|gb|GU323293.1| 6661 g1699 i0 100 100 160 0 100 0 1 160 310 469 Artemia franciscana isolate GNM 002 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 16000 296 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
7492554 7492554 PRJNA529224_S_NODE_146_length_412_cov_575.953003_g139_i0 PRJNA529224 146 412 575.953003 2372.92637236 Artemia 6660 Arthropoda Arthropoda 749 0   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g139 i0 99.513 46.7572815533981 411 2 99 0 2 412 355 765 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 19264 749 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
7492572 7492572 PRJNA529224_S_NODE_346_length_314_cov_754.807018_g339_i0 PRJNA529224 346 314 754.807018 2370.09403652 Artemia 6660 Arthropoda Arthropoda 566 8.489999999999998e-157   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g339 i0 99.359 88.703821656051 312 2 99 0 3 314 766 1077 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 27853 566 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
8767489 8767489 PRJNA529224_S_NODE_1927_length_151_cov_11.631148_g1920_i0 PRJNA529224 1927 151 11.631148 17.56303348 Calanoida 6833 Arthropoda Arthropoda 243 6.81e-60   NTclustered gi|13877160|gb|AF367719.1|AF367719 6837 g1920 i0 97.872 92.7218543046358 141 2 93 1 11 151 1399 1538 Calanus finmarchicus 18S small subunit ribosomal RNA gene, partial sequence blastn 14001 243 1 Eukaryota Opisthokonta Metazoa Arthropoda Hexanauplia Calanoida Calanidae Calanus Calanus finmarchicus
10701989 10701989 PRJNA529224_S_NODE_1069_length_201_cov_7.191860_g1062_i0 PRJNA529224 1069 201 7.19186 14.4556386 Neoleptoneta serena 1124203 Arthropoda Arthropoda 56.5 0.001   NTclustered gi|373502653|gb|JN378385.1| 1124203 g1062 i0 81.69 0.960199004975124 71 10 34 2 133 201 554 485 Neoleptoneta serena voucher 9040724 28S ribosomal RNA gene, partial sequence blastn 193 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Leptonetidae Neoleptoneta Neoleptoneta serena
11317679 11317679 PRJNA529224_S_NODE_489_length_277_cov_671.572581_g482_i0 PRJNA529224 489 277 671.572581 1860.25604937 Artemia 6660 Arthropoda Arthropoda 501 2.11e-137   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g482 i0 99.278 37.5379061371841 277 2 100 0 1 277 67 343 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 10398 501 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
11317691 11317691 PRJNA529224_S_NODE_9_length_871_cov_547.194774_g6_i0 PRJNA529224 9 871 547.194774 4766.06648154 Artemia 6660 Arthropoda Arthropoda 1539 0   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g6 i0 98.621 65.150401836969 870 11 99 1 1 869 2493 1624 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 56746 1539 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
15800608 15800608 PRJNA529224_S_NODE_1013_length_205_cov_584.352273_g1006_i0 PRJNA529224 1013 205 584.352273 1197.92215965 Bactrocera neohumeralis 98809 Arthropoda Arthropoda 372 1.21e-98   NTclustered gi|2293659406|ref|XR_007669052.1| 98809 g1006 i0 99.51 105.482926829268 204 1 99 0 1 204 2616 2819 PREDICTED: Bactrocera neohumeralis large subunit ribosomal RNA (LOC126767288), rRNA blastn 21624 372 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Tephritidae Bactrocera Bactrocera neohumeralis
16417252 16417252 PRJNA529224_S_NODE_533_length_265_cov_555.813559_g526_i0 PRJNA529224 533 265 555.813559 1472.90593135 Artemia 6660 Arthropoda Arthropoda 479 9.38e-131   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g526 i0 99.248 101.588679245283 266 1 100 1 1 265 2664 2929 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 26921 479 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
16417261 16417261 PRJNA529224_S_NODE_813_length_223_cov_442.530928_g806_i0 PRJNA529224 813 223 442.530928 986.84396944 Artemia 6660 Arthropoda Arthropoda 396 7.939999999999995e-106   NTclustered gi|2295022767|gb|OP365120.1| 6661 g806 i0 98.655 99.9865470852018 223 3 100 0 1 223 1273 1495 Artemia franciscana isolate soni103 small subunit ribosomal RNA gene, partial sequence blastn 22297 396 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
17075291 17075291 PRJNA529224_S_NODE_114_length_444_cov_16.809639_g107_i0 PRJNA529224 114 444 16.809639 74.63479716 Artemia franciscana 6661 Arthropoda Arthropoda 440 7.849999999999997e-119   NTclustered gi|2743049377|ref|XM_065720999.1| 6661 g107 i0 95.652 1.39414414414414 276 9 62 2 162 437 3717 3445 PREDICTED: Artemia franciscana lachesin-like (LOC136038049), transcript variant X2, mRNA blastn 619 440 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
18966057 18966057 PRJNA529224_S_NODE_1115_length_197_cov_519.523810_g1108_i0 PRJNA529224 1115 197 519.52381 1023.4619057 Artemia 6660 Arthropoda Arthropoda 353 4.18e-93   NTclustered gi|2295022767|gb|OP365120.1| 6661 g1108 i0 98.985 100.081218274112 197 2 100 0 1 197 805 1001 Artemia franciscana isolate soni103 small subunit ribosomal RNA gene, partial sequence blastn 19716 353 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
20240950 20240950 PRJNA529224_S_NODE_1156_length_194_cov_11.854545_g1149_i0 PRJNA529224 1156 194 11.854545 22.9978173 Artemia 6660 Arthropoda Arthropoda 359 8.809999999999999e-95   NTclustered gi|288551058|gb|GU323293.1| 6661 g1149 i0 100 100.005154639175 194 0 100 0 1 194 264 71 Artemia franciscana isolate GNM 002 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 19401 359 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
20240954 20240954 PRJNA529224_S_NODE_1496_length_174_cov_7.558621_g1489_i0 PRJNA529224 1496 174 7.558621 13.15200054 Entomobryomorpha 730330 Arthropoda Arthropoda 316 4.7e-82   NTclustered gi|472455904|gb|KC236258.1| 187695 g1489 i0 99.425 100.436781609195 174 1 100 0 1 174 141 314 Sinella curviseta 18S ribosomal RNA gene, partial sequence blastn 17476 316 1 Eukaryota Opisthokonta Metazoa Arthropoda Collembola Entomobryomorpha Entomobryidae Sinella Sinella curviseta
21516460 21516460 PRJNA529224_S_NODE_537_length_264_cov_510.570213_g530_i0 PRJNA529224 537 264 510.570213 1347.90536232 Artemia 6660 Arthropoda Arthropoda 473 4.3399999999999986e-129   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g530 i0 99.237 99.905303030303 262 2 99 0 1 262 1452 1191 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 26375 473 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
22174786 22174786 PRJNA529224_S_NODE_658_length_242_cov_8.657277_g651_i0 PRJNA529224 658 242 8.657277 20.95061034 Microvelia longipes 1101180 Arthropoda Arthropoda 176 1.24e-39   NTclustered gi|1591624019|gb|MH591927.1| 1101180 g651 i0 98.98 0.40495867768595 98 1 40 0 1 98 2872 2969 Microvelia longipes 28S ribosomal RNA gene, partial sequence blastn 98 176 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Veliidae Microvelia Microvelia longipes
24066418 24066418 PRJNA529224_S_NODE_699_length_236_cov_581.714976_g692_i0 PRJNA529224 699 236 581.714976 1372.84734336 Artemia 6660 Arthropoda Arthropoda 424 3.89e-114   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g692 i0 99.149 104.228813559322 235 2 99 0 2 236 1410 1644 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 24598 424 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
24723992 24723992 PRJNA529224_S_NODE_1060_length_201_cov_823.540698_g1053_i0 PRJNA529224 1060 201 823.540698 1655.31680298 Artemia sp. 6662 Arthropoda Arthropoda 350 5.539999999999999e-92   NTclustered gi|161177|gb|M33097.1|SHRRGBA 6662 g1053 i0 98.01 56.5273631840796 201 4 100 0 1 201 368 168 Artemia sp. 5.8S ribosomal RNA gene, complete sequence blastn 11362 350 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia sp.
25340843 25340843 PRJNA529224_S_NODE_1200_length_189_cov_38.700000_g1193_i0 PRJNA529224 1200 189 38.7 73.143 root 1 Root_unresolved Root_unresolved 350 5.14e-92   NTclustered gi|83281396|gb|AC167967.6| 7176 g1193 i0 100 163 189 0 100 0 1 189 126 314 Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence blastn 30807 350 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Culex Culex quinquefasciatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;