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contig_metadata

13 rows where bioproject = "PRJNA529224", tax_clade = "Opisthokonta" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 13 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 13 ✖

bioproject 1

  • PRJNA529224 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
497999 497999 PRJNA529224_S_NODE_1581_length_167_cov_11.833333_g1574_i0 PRJNA529224 1581 167 11.833333 19.76166611 uncultured Filobasidiella 1503101 Fungi Fungi 231 1.68e-56   NTclustered gi|387156411|emb|HE806144.1| 1503101 g1574 i0 91.617 146.826347305389 167 14 100 0 1 167 1656 1822 Uncultured Filobasidiella partial 26S rRNA gene, clone Ao0Yyyy6 blastn 24520 231 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae   uncultured Filobasidiella
1114437 1114437 PRJNA529224_S_NODE_1561_length_168_cov_138.985612_g1554_i0 PRJNA529224 1561 168 138.985612 233.49582816 Malassezia 55193 Fungi Fungi 309 7.58e-80   NTclustered gi|953821272|gb|KT310070.1| 76773 g1554 i0 100 99.0892857142857 167 0 99 0 2 168 670 836 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 16647 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
1114453 1114453 PRJNA529224_S_NODE_341_length_317_cov_97.836806_g334_i0 PRJNA529224 341 317 97.836806 310.14267502 Opisthokonta 33154 Fungi Fungi 560 3.99e-155   NTclustered gi|915512607|gb|KP825390.1| 76775 g334 i0 100 93.5141955835962 303 0 96 0 15 317 242 544 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 29644 560 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
1114465 1114465 PRJNA529224_S_NODE_981_length_208_cov_95.905028_g974_i0 PRJNA529224 981 208 95.905028 199.48245824 Tremellomycetes 155616 Fungi Fungi 346 7.460000000000001e-91   NTclustered gi|1854401|dbj|D64123.1| 57688 g974 i0 96.651 100.490384615385 209 6 100 1 1 208 151 359 Fibulobasidium inconspicuum gene for small subunit ribosomal RNA blastn 20902 346 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Sirobasidiaceae Fibulobasidium Fibulobasidium inconspicuum
2389996 2389996 PRJNA529224_S_NODE_1942_length_150_cov_13.264463_g1935_i0 PRJNA529224 1942 150 13.264463 19.8966945 Ustilaginaceae 5268 Fungi Fungi 276 6.660000000000001e-70   NTclustered gi|1358186638|gb|MH047195.1| 5270 g1935 i0 100 44.46 149 0 99 0 1 149 4566 4418 Mycosarcoma maydis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6669 276 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
4324924 4324924 PRJNA529224_S_NODE_444_length_288_cov_111.517375_g437_i0 PRJNA529224 444 288 111.517375 321.17004 Malassezia restricta 76775 Fungi Fungi 307 5.15e-79   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g437 i0 86.806 59.9340277777778 288 23 99 11 2 288 3372 3099 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 17261 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10702001 10702001 PRJNA529224_S_NODE_1929_length_151_cov_9.049180_g1922_i0 PRJNA529224 1929 151 9.04918 13.6642618 Malassezia globosa 76773 Fungi Fungi 279 5.19e-71   NTclustered gi|1805972860|gb|CP046440.1| 76773 g1922 i0 100 68.4966887417219 151 0 100 0 1 151 2094 1944 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 10343 279 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
13251852 13251852 PRJNA529224_S_NODE_1751_length_158_cov_7.434109_g1744_i0 PRJNA529224 1751 158 7.434109 11.74589222 Leucosporidium sp. AY30 662878 Fungi Fungi 270 3.3099999999999996e-68   NTclustered gi|254927417|gb|GQ336996.1| 662878 g1744 i0 97.468 103.012658227848 158 4 100 0 1 158 5166 5009 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 16276 270 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
15142602 15142602 PRJNA529224_S_NODE_892_length_215_cov_27.397849_g885_i0 PRJNA529224 892 215 27.397849 58.90537535 Symmetrospora 1798808 Fungi Fungi 342 9.999999999999999e-90   NTclustered gi|769115784|gb|KJ701195.1| 5441 g885 i0 95.349 99.8511627906977 215 10 100 0 1 215 1065 851 Symmetrospora oryzicola voucher MCA4496 18S ribosomal RNA gene, partial sequence blastn 21468 342 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes   Symmetrosporaceae Symmetrospora Symmetrospora oryzicola
20240956 20240956 PRJNA529224_S_NODE_1576_length_167_cov_426.166667_g1569_i0 PRJNA529224 1576 167 426.166667 711.69833389 Basidiomycota 5204 Fungi Fungi 265 1.65e-66   NTclustered gi|406205|dbj|D12803.1|ERHSSRD3 5414 g1569 i0 95.21 99.9640718562874 167 8 100 0 1 167 1409 1243 Erythrobasidium hasegawianum gene for small subunit ribosomal RNA blastn 16694 265 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
22791611 22791611 PRJNA529224_S_NODE_338_length_319_cov_134.186207_g331_i0 PRJNA529224 338 319 134.186207 428.05400033 Malassezia 55193 Fungi Fungi 564 3.109999999999999e-156   NTclustered gi|915512591|gb|KP825374.1| 76773 g331 i0 100 93.4326018808777 305 0 96 0 15 319 340 644 Malassezia globosa strain ISOSEB48F 28S ribosomal RNA gene, partial sequence blastn 29805 564 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
24066410 24066410 PRJNA529224_S_NODE_1899_length_152_cov_18.910569_g1892_i0 PRJNA529224 1899 152 18.910569 28.74406488 Basidiomycota 5204 Fungi Fungi 265 1.47e-66   NTclustered gi|2905253667|dbj|LC438620.1| 5537 g1892 i0 98.026 100 152 3 100 0 1 152 257 106 Rhodotorula mucilaginosa K6 gene for 26S ribosomalRNA, partial sequence blastn 15200 265 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula mucilaginosa
25340872 25340872 PRJNA529224_S_NODE_640_length_245_cov_160.750000_g633_i0 PRJNA529224 640 245 160.75 393.8375 Malassezia 55193 Fungi Fungi 444 3.12e-120   NTclustered gi|1101565660|gb|KX839636.1| 55194 g633 i0 99.588 99.1836734693878 243 1 99 0 3 245 14 256 Malassezia furfur isolate GDMUZJ2015102 26S ribosomal RNA gene, partial sequence blastn 24300 444 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;