contig_metadata
10 rows where bioproject = "PRJNA527965" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 496867 | 496867 | PRJNA527965_S_NODE_1_length_2687_cov_15.765083_g0_i0 | PRJNA527965 | 1 | 2687 | 15.765083 | 423.60778021 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 171 | 7.38e-37 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g0 | i0 | 84.27 | 14.4216598436918 | 178 | 25 | 7 | 3 | 1923 | 2098 | 74373 | 74549 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 38751 | 171 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 6874601 | 6874601 | PRJNA527965_S_NODE_726_length_413_cov_168.711640_g643_i0 | PRJNA527965 | 726 | 413 | 168.71164 | 696.7790732 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 616 | 1.1199999999999996e-171 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g643 | i0 | 93.51 | 95.0338983050847 | 416 | 23 | 100 | 4 | 1 | 413 | 3522 | 3936 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 39249 | 616 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 10700897 | 10700897 | PRJNA527965_S_NODE_5089_length_166_cov_2.137405_g5006_i0 | PRJNA527965 | 5089 | 166 | 2.1374050000000002 | 3.5480923 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 207 | 2.8e-49 | NTclustered | gi|40074290|gb|AY487827.1| | 555314 | g5006 | i0 | 89.286 | 3.03012048192771 | 168 | 14 | 100 | 4 | 1 | 166 | 746 | 911 | Spirochaeta aurantia 16S ribosomal RNA gene, partial sequence; tRNA-Ala gene, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 503 | 207 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 10700901 | 10700901 | PRJNA527965_S_NODE_5249_length_163_cov_3.109375_g5166_i0 | PRJNA527965 | 5249 | 163 | 3.109375 | 5.06828125 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 252 | 1.25e-62 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g5166 | i0 | 94.479 | 43.9386503067485 | 163 | 9 | 100 | 0 | 1 | 163 | 2014 | 2176 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 7162 | 252 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 17074231 | 17074231 | PRJNA527965_S_NODE_6134_length_151_cov_7.750000_g6051_i0 | PRJNA527965 | 6134 | 151 | 7.75 | 11.7025 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 279 | 5.19e-71 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g6051 | i0 | 100 | 151.086092715232 | 151 | 0 | 100 | 0 | 1 | 151 | 4112 | 3962 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 22814 | 279 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 20898998 | 20898998 | PRJNA527965_S_NODE_2977_length_221_cov_3.596774_g2894_i0 | PRJNA527965 | 2977 | 221 | 3.596774 | 7.94887054 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 375 | 1.0199999999999998e-99 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g2894 | i0 | 97.706 | 141.877828054299 | 218 | 5 | 99 | 0 | 1 | 218 | 3274 | 3057 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 31355 | 375 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 21516257 | 21516257 | PRJNA527965_S_NODE_1437_length_319_cov_16.443662_g1354_i0 | PRJNA527965 | 1437 | 319 | 16.443662 | 52.45528178 | Spirochaetia | 203692 | Bacteria | Bacteria | 361 | 4.38e-95 | NTclustered | gi|110264527|gb|DQ522190.1| | 173 | g1354 | i0 | 90.741 | 98.4545454545455 | 270 | 25 | 85 | 0 | 50 | 319 | 517 | 786 | Leptospira interrogans clone BEL08MA_1 16S ribosomal RNA gene, partial sequence | blastn | 31407 | 361 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira interrogans | ||
| 22791412 | 22791412 | PRJNA527965_S_NODE_2378_length_250_cov_2.897674_g2295_i0 | PRJNA527965 | 2378 | 250 | 2.897674 | 7.244185 | Treponema | 157 | Bacteria | Bacteria | 252 | 2.08e-62 | NTclustered | gi|1732601887|gb|CP042818.1| | 162 | g2295 | i0 | 85.2 | 192.304 | 250 | 32 | 99 | 5 | 3 | 250 | 2502861 | 2503107 | Treponema phagedenis strain B43.1 chromosome, complete genome | blastn | 48076 | 252 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema phagedenis | ||
| 23449222 | 23449222 | PRJNA527965_S_NODE_1979_length_278_cov_5.650206_g1896_i0 | PRJNA527965 | 1979 | 278 | 5.650206 | 15.70757268 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 294 | 3.85e-75 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g1896 | i0 | 89.831 | 299.111510791367 | 236 | 15 | 83 | 7 | 1 | 231 | 2531 | 2300 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 83153 | 294 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 23449319 | 23449319 | PRJNA527965_S_NODE_779_length_402_cov_30.258856_g696_i0 | PRJNA527965 | 779 | 402 | 30.258856 | 121.64060112 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 603 | 8.479999999999998e-168 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g696 | i0 | 93.827 | 305.778606965174 | 405 | 18 | 99 | 6 | 2 | 402 | 3113 | 2712 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 122923 | 603 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;