RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA527965" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA527965 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23449231 23449231 PRJNA527965_S_NODE_2379_length_250_cov_2.725581_g2296_i0 PRJNA527965 2379 250 2.725581 6.8139525 uncultured Blastocladiomycota 587038 Fungi Fungi 440 4.1399999999999976e-119   NTclustered gi|219960023|gb|FJ567563.1| 587038 g2296 i0 98.4 88.784 250 4 100 0 1 250 362 113 Uncultured Blastocladiomycota clone A7YM11RM1 large subunit ribosomal RNA gene, partial sequence blastn 22196 440 1 Eukaryota Opisthokonta Fungi Blastocladiomycota         uncultured Blastocladiomycota
24722877 24722877 PRJNA527965_S_NODE_1260_length_337_cov_18.076159_g1177_i0 PRJNA527965 1260 337 18.076159 60.91665583 Catenomyces persicinus 281913 Fungi Fungi 534 2.59e-147   NTclustered gi|82398336|gb|DQ273789.1| 281913 g1177 i0 96.308 96.1157270029674 325 12 96 0 13 337 26 350 Catenomyces sp. JEL342 isolate AFTOL-ID 47 28S ribosomal RNA gene, partial sequence blastn 32391 534 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenomyces Catenomyces persicinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;