contig_metadata
16 rows where bioproject = "PRJNA527965", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1772095 | 1772095 | PRJNA527965_S_NODE_5182_length_164_cov_6.170543_g5099_i0 | PRJNA527965 | 5182 | 164 | 6.170543 | 10.11969052 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 254 | 3.5e-63 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g5099 | i0 | 94.512 | 116.426829268293 | 164 | 9 | 100 | 0 | 1 | 164 | 860522 | 860359 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 19094 | 254 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 2389861 | 2389861 | PRJNA527965_S_NODE_6262_length_150_cov_2.182609_g6179_i0 | PRJNA527965 | 6262 | 150 | 2.182609 | 3.2739135 | Bdellovibrio | 958 | Bacteria | Bacteria | 78.7 | 2.02e-10 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g6179 | i0 | 87.143 | 37.3466666666667 | 70 | 7 | 45 | 2 | 1 | 68 | 2948778 | 2948847 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 5602 | 78.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 3665549 | 3665549 | PRJNA527965_S_NODE_1123_length_352_cov_6.006309_g1040_i0 | PRJNA527965 | 1123 | 352 | 6.006309 | 21.14220768 | Peredibacter | 263370 | Bacteria | Bacteria | 453 | 7.810000000000001e-123 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g1040 | i0 | 90.085 | 120.204545454545 | 353 | 29 | 100 | 3 | 1 | 352 | 512675 | 512328 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 42312 | 453 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 3665562 | 3665562 | PRJNA527965_S_NODE_2263_length_257_cov_5.265766_g2180_i0 | PRJNA527965 | 2263 | 257 | 5.265766 | 13.53301862 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 315 | 2.7e-81 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g2180 | i0 | 90.083 | 182.280155642023 | 242 | 24 | 94 | 0 | 2 | 243 | 10 | 251 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 46846 | 315 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 6874535 | 6874535 | PRJNA527965_S_NODE_3066_length_217_cov_34.032967_g2983_i0 | PRJNA527965 | 3066 | 217 | 34.032967 | 73.85153839 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 291 | 3.729999999999999e-74 | NTclustered | gi|1950812799|gb|CP066681.1| | 349221 | g2983 | i0 | 90.826 | 186.889400921659 | 218 | 19 | 100 | 1 | 1 | 217 | 659588 | 659805 | Micavibrio aeruginosavorus isolate NC_groundwater_70_Ag_B-0.1um_54_66 chromosome | blastn | 40555 | 291 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 10042810 | 10042810 | PRJNA527965_S_NODE_1568_length_309_cov_10.777372_g1485_i0 | PRJNA527965 | 1568 | 309 | 10.777372 | 33.30207948 | Bdellovibrio | 958 | Bacteria | Bacteria | 549 | 8.389999999999996e-152 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g1485 | i0 | 98.706 | 121.724919093851 | 309 | 4 | 100 | 0 | 1 | 309 | 813646 | 813338 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 37613 | 549 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13250699 | 13250699 | PRJNA527965_S_NODE_1471_length_316_cov_6.014235_g1388_i0 | PRJNA527965 | 1471 | 316 | 6.014235 | 19.0049826 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 436 | 6.9899999999999996e-118 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g1388 | i0 | 93.793 | 278.642405063291 | 290 | 18 | 92 | 0 | 12 | 301 | 698887 | 699176 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 88051 | 436 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 13250787 | 13250787 | PRJNA527965_S_NODE_6031_length_152_cov_230.059829_g5948_i0 | PRJNA527965 | 6031 | 152 | 230.059829 | 349.69094008 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 202 | 1.1699999999999998e-47 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g5948 | i0 | 90.789 | 195.348684210526 | 152 | 13 | 100 | 1 | 1 | 152 | 815424 | 815274 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 29693 | 202 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13250800 | 13250800 | PRJNA527965_S_NODE_891_length_383_cov_15.612069_g808_i0 | PRJNA527965 | 891 | 383 | 15.612069 | 59.79422427 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 470 | 8.509999999999999e-128 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g808 | i0 | 89.474 | 278.671018276762 | 380 | 28 | 98 | 12 | 8 | 383 | 815231 | 815602 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 106731 | 470 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13868102 | 13868102 | PRJNA527965_S_NODE_2131_length_265_cov_4.330435_g2048_i0 | PRJNA527965 | 2131 | 265 | 4.330435 | 11.47565275 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 340 | 4.62e-89 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g2048 | i0 | 89.85 | 137.483018867925 | 266 | 25 | 100 | 2 | 1 | 265 | 665996 | 665732 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 36433 | 340 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 15799481 | 15799481 | PRJNA527965_S_NODE_153_length_739_cov_13.767045_g55_i1 | PRJNA527965 | 153 | 739 | 13.767045 | 101.73846255 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 1188 | 0 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g55 | i1 | 95.924 | 203.105548037889 | 736 | 25 | 99 | 3 | 4 | 739 | 666711 | 665981 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 150095 | 1188 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 16417081 | 16417081 | PRJNA527965_S_NODE_533_length_468_cov_4.055427_g451_i0 | PRJNA527965 | 533 | 468 | 4.055427 | 18.97939836 | Bdellovibrio | 958 | Bacteria | Bacteria | 774 | 0 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g451 | i0 | 97.363 | 85.8782051282051 | 455 | 12 | 97 | 0 | 14 | 468 | 816443 | 816897 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 40191 | 774 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 19622853 | 19622853 | PRJNA527965_S_NODE_1316_length_331_cov_7.668919_g1233_i0 | PRJNA527965 | 1316 | 331 | 7.668919 | 25.38412189 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 446 | 1.22e-120 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g1233 | i0 | 91.667 | 3.35347432024169 | 324 | 24 | 98 | 3 | 9 | 331 | 2982634 | 2982955 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 1110 | 446 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 20240796 | 20240796 | PRJNA527965_S_NODE_416_length_507_cov_58.010593_g335_i0 | PRJNA527965 | 416 | 507 | 58.010593 | 294.11370651 | Bacteriovorax | 146784 | Bacteria | Bacteria | 556 | 8.62e-154 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g335 | i0 | 86.64 | 150.264299802761 | 509 | 60 | 99 | 8 | 3 | 507 | 1660853 | 1660349 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 76184 | 556 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 21516315 | 21516315 | PRJNA527965_S_NODE_637_length_440_cov_3.807407_g555_i0 | PRJNA527965 | 637 | 440 | 3.807407 | 16.7525908 | Bdellovibrio | 958 | Bacteria | Bacteria | 710 | 0 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g555 | i0 | 96.296 | 85.7431818181818 | 432 | 16 | 98 | 0 | 1 | 432 | 816897 | 816466 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 37727 | 710 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 24066241 | 24066241 | PRJNA527965_S_NODE_5099_length_166_cov_1.603053_g5016_i0 | PRJNA527965 | 5099 | 166 | 1.603053 | 2.66106798 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 211 | 2.17e-50 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g5016 | i0 | 89.759 | 55.1626506024096 | 166 | 15 | 99 | 2 | 1 | 165 | 335 | 499 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 9157 | 211 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;