RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA527965", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA527965 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19622947 19622947 PRJNA527965_S_NODE_5296_length_163_cov_1.242188_g5213_i0 PRJNA527965 5296 163 1.242188 2.02476644 Ephydatia fluviatilis 31330 Porifera other_Eukaryota 279 5.73e-71   NTclustered gi|2268710978|emb|OX176771.1| 31330 g5213 i0 97.546 99.1165644171779 163 4 100 0 1 163 2896 2734 Ephydatia fluviatilis partial 28S rRNA gene blastn 16156 279 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Spongillida Spongillidae Ephydatia Ephydatia fluviatilis
22173674 22173674 PRJNA527965_S_NODE_3978_length_190_cov_3.000000_g3895_i0 PRJNA527965 3978 190 3 5.7 Ephydatia fluviatilis 31330 Porifera other_Eukaryota 346 6.690000000000001e-91   NTclustered gi|2268710978|emb|OX176771.1| 31330 g3895 i0 99.474 3 190 1 100 0 1 190 3628 3439 Ephydatia fluviatilis partial 28S rRNA gene blastn 570 346 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Spongillida Spongillidae Ephydatia Ephydatia fluviatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;