RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA527965", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA527965 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3047939 3047939 PRJNA527965_S_NODE_803_length_398_cov_51.501377_g720_i0 PRJNA527965 803 398 51.501377 204.97548046 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 475 1.91e-129   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g720 i0 93.949 49.2587939698492 314 19 79 0 85 398 3542 3229 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 19605 475 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019
22173721 22173721 PRJNA527965_S_NODE_818_length_394_cov_64.665738_g735_i0 PRJNA527965 818 394 64.665738 254.78300772 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 503 8.659999999999997e-138   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g735 i0 95.556 49.6091370558376 315 12 80 2 81 394 3542 3229 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 19546 503 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019
30045641 30045641 PRJNA527965_S_NODE_4911_length_169_cov_1.350746_g4828_i0 PRJNA527965 4911 169 1.350746 2.28276074 Capitella teleta 283909 Annelida Annelida 39.3 0.0435   NR ELU05767.1 283909 g4828 i0 57.1 0.621301775147929 35 10 62.1 1 1 105 38 67 ELU05767.1 hypothetical protein CAPTEDRAFT_142127, partial [Capitella teleta] diamond 105 39.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;