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contig_metadata

8 rows where bioproject = "PRJNA526367" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA526367 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3046918 3046918 PRJNA526367_P_NODE_34203_length_209_cov_13.262500_g33993_i0 PRJNA526367 34203 209 13.2625 27.718625 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 351 1.61e-92   NTclustered gi|2651357791|gb|PP174306.1| 41631 g33993 i0 98.02 55.6315789473684 202 4 97 0 1 202 3448 3247 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11627 351 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
3665039 3665039 PRJNA526367_P_NODE_41623_length_180_cov_3.610687_g41413_i0 PRJNA526367 41623 180 3.610687 6.4992366 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 176 8.68e-40   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g41413 i0 96.262 1.78333333333333 107 4 59 0 74 180 3082 2976 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 321 176 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
3665064 3665064 PRJNA526367_P_NODE_43763_length_176_cov_6.692913_g43553_i0 PRJNA526367 43763 176 6.692913 11.77952688 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 292 8.04e-75   NTclustered gi|1802599793|gb|MT001202.1| 41631 g43553 i0 98.214 95.5340909090909 168 2 95 1 3 169 1402 1235 Colpoda sp. strain HFCC1281 small subunit ribosomal RNA gene, partial sequence blastn 16814 292 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
4942025 4942025 PRJNA526367_P_NODE_41424_length_180_cov_5.732824_g41214_i0 PRJNA526367 41424 180 5.732824 10.3190832 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 318 1.36e-82   NTclustered gi|1802599794|gb|MT001203.1| 41631 g41214 i0 100 95.6888888888889 172 0 96 0 7 178 738 909 Colpoda sp. strain HFCC848 small subunit ribosomal RNA gene, partial sequence blastn 17224 318 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
5599998 5599998 PRJNA526367_P_NODE_50225_length_167_cov_1.728814_g50015_i0 PRJNA526367 50225 167 1.728814 2.88711938 Euplotes woodruffi 5942 SAR_Eukaryotes SAR_Eukaryotes 274 2.75e-69   NTclustered gi|1233819913|gb|KX516605.1| 5942 g50015 i0 97.516 32.3592814371258 161 2 96 2 1 160 1808 1649 Euplotes woodruffi isolate Z1 large subunit ribosomal RNA gene, partial sequence blastn 5404 274 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes woodruffi
13249798 13249798 PRJNA526367_P_NODE_34231_length_209_cov_4.950000_g34021_i0 PRJNA526367 34231 209 4.95 10.3455 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 357 3.47e-94   NTclustered gi|523704203|emb|HE861887.1| 1200497 g34021 i0 98.995 95.8516746411483 199 2 95 0 8 206 378 576 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 20033 357 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
14524903 14524903 PRJNA526367_P_NODE_39712_length_183_cov_5.850746_g39502_i0 PRJNA526367 39712 183 5.850746 10.70686518 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 298 1.81e-76   NTclustered gi|2651357791|gb|PP174306.1| 41631 g39502 i0 97.688 65.4972677595628 173 4 95 0 4 176 3591 3419 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11986 298 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
18347869 18347869 PRJNA526367_P_NODE_61735_length_156_cov_2.766355_g61525_i0 PRJNA526367 61735 156 2.766355 4.3155138 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 265 1.52e-66   NTclustered gi|1073548544|gb|KU219950.1| 5932 g61525 i0 98.667 97.8974358974359 150 1 96 1 1 149 2240 2091 Ichthyophthirius multifiliis isolate Ich.BR 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15272 265 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;