RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA526367" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA526367 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26602328 26602328 PRJNA526367_P_NODE_46641_length_172_cov_2.487805_g46431_i0 PRJNA526367 46641 172 2.487805 4.2790246 Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_ 2035772 Bacteria Bacteria 48.1 1.28e-4   NR PIW68877.1 1974751 g46431 i0 36 2.63372093023256 50 32 87.2 0 20 169 45 94 PIW68877.1 MAG: hypothetical protein COW10_00150 [Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_42_8] diamond 453 48.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_42_8
30709194 30709194 PRJNA526367_P_NODE_52414_length_165_cov_4.043103_g52204_i0 PRJNA526367 52414 165 4.043103 6.67111995 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 41.2 0.0454   NR MFC1508989.1 2035772 g52204 i0 48.6 0.672727272727273 37 19 67.3 0 113 3 516 552 MFC1508989.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 111 41.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;