RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA526367", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA526367 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6873794 6873794 PRJNA526367_P_NODE_44846_length_175_cov_1.547619_g44636_i0 PRJNA526367 44846 175 1.547619 2.70833325 Bradybaena similaris 145626 Mollusca Mollusca 65.8 1.89e-6   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g44636 i0 97.368 0.217142857142857 38 1 22 0 70 107 60563937 60563900 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 38 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
15141537 15141537 PRJNA526367_P_NODE_22112_length_324_cov_2.261818_g21903_i0 PRJNA526367 22112 324 2.261818 7.32829032 Metazoa 33208 Mollusca Mollusca 52.8 0.03   NTclustered gi|2694033177|ref|XM_063572161.1| 6551 g21903 i0 100 0.259259259259259 28 0 9 0 58 85 4990 5017 PREDICTED: Mytilus trossulus serum paraoxonase/arylesterase 1-like (LOC134711528), transcript variant X2, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
18347308 18347308 PRJNA526367_P_NODE_21555_length_324_cov_2.309091_g21346_i0 PRJNA526367 21555 324 2.309091 7.48145484 Bradybaena similaris 145626 Mollusca Mollusca 63.9 1.41e-5   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g21346 i0 97.297 0.114197530864198 37 1 11 0 249 285 65080533 65080497 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 37 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;