RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA526367", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA526367 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5600116 5600116 PRJNA526367_P_NODE_56185_length_162_cov_3.654867_g55975_i0 PRJNA526367 56185 162 3.654867 5.92088454 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 220 3.49e-53   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g55975 i0 92.308 24.2222222222222 156 10 96 2 1 155 5032801 5032647 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 3924 220 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
11974740 11974740 PRJNA526367_P_NODE_3890_length_348_cov_2.672241_g3682_i0 PRJNA526367 3890 348 2.672241 9.29939868 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.003   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g3682 i0 100 0.655172413793103 30 0 9 0 318 347 9582275 9582304 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 228 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23448376 23448376 PRJNA526367_P_NODE_39199_length_184_cov_5.140741_g38989_i0 PRJNA526367 39199 184 5.140741 9.45896344 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 207 3.16e-49   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g38989 i0 90.909 5.44565217391304 154 14 84 0 8 161 5032575 5032728 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1002 207 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;