contig_metadata
15 rows where bioproject = "PRJNA526367", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4322738 | 4322738 | PRJNA526367_P_NODE_26344_length_324_cov_1.898182_g26135_i0 | PRJNA526367 | 26344 | 324 | 1.898182 | 6.15010968 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 82.4 | 3.88e-11 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g26135 | i0 | 91.525 | 0.182098765432099 | 59 | 5 | 18 | 0 | 8 | 66 | 914841 | 914899 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 59 | 82.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4323232 | 4323232 | PRJNA526367_P_NODE_62264_length_155_cov_4.792453_g62054_i0 | PRJNA526367 | 62264 | 155 | 4.792453 | 7.42830215 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 73.2 | 1.75e-13 | NR | MCE2684212.1 | 2499141 | g62054 | i0 | 92.3 | 0.754838709677419 | 39 | 3 | 75.5 | 0 | 144 | 28 | 339 | 377 | MCE2684212.1 mechanosensitive ion channel family protein [Verrucomicrobiia bacterium] | diamond | 117 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 8149107 | 8149107 | PRJNA526367_P_NODE_44087_length_176_cov_3.157480_g43877_i0 | PRJNA526367 | 44087 | 176 | 3.15748 | 5.5571648 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 111 | 5.61e-27 | NR | MEY4854465.1 | 2026799 | g43877 | i0 | 100 | 1.90909090909091 | 56 | 0 | 95.5 | 0 | 175 | 8 | 344 | 399 | MEY4854465.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 336 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 13250258 | 13250258 | PRJNA526367_P_NODE_8411_length_324_cov_4.040000_g8202_i0 | PRJNA526367 | 8411 | 324 | 4.04 | 13.0896 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 119 | 2.96e-22 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g8202 | i0 | 90.11 | 0.280864197530864 | 91 | 9 | 28 | 0 | 232 | 322 | 1705622 | 1705532 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 91 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 22172741 | 22172741 | PRJNA526367_P_NODE_38178_length_186_cov_3.700730_g37968_i0 | PRJNA526367 | 38178 | 186 | 3.70073 | 6.8833578 | Bacteria | 2 | Bacteria | Bacteria | 101 | 1.9099999999999994e-24 | NR | WP_035604128.1 | 1396141 | g37968 | i0 | 70.2 | 4.56451612903226 | 57 | 17 | 91.9 | 0 | 184 | 14 | 115 | 171 | WP_035604128.1 glycoside hydrolase family 16 protein [Haloferula sp. BvORR071] | diamond | 849 | 102 | 0.990196078431373 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Haloferula | Haloferula sp. BvORR071 | |
| 23448460 | 23448460 | PRJNA526367_P_NODE_44719_length_175_cov_3.015873_g44509_i0 | PRJNA526367 | 44719 | 175 | 3.015873 | 5.27777775 | Bacteria | 2 | Bacteria | Bacteria | 99.8 | 8.89e-23 | NR | MBN8459424.1 | 2026799 | g44509 | i0 | 89.1 | 7.54285714285714 | 55 | 6 | 94.3 | 0 | 9 | 173 | 260 | 314 | MBN8459424.1 phage portal protein [Verrucomicrobiota bacterium] | diamond | 1320 | 100 | 0.998 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28056385 | 28056385 | PRJNA526367_P_NODE_43225_length_177_cov_5.500000_g43015_i0 | PRJNA526367 | 43225 | 177 | 5.5 | 9.735 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 108 | 1.41e-28 | NR | MEY4815829.1 | 2026799 | g43015 | i0 | 94.5 | 0.932203389830508 | 55 | 3 | 93.2 | 0 | 9 | 173 | 90 | 144 | MEY4815829.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 165 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28498721 | 28498721 | PRJNA526367_P_NODE_60027_length_158_cov_4.486239_g59817_i0 | PRJNA526367 | 60027 | 158 | 4.486239 | 7.08825762 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 97.4 | 2.39e-22 | NR | MCF7709931.1 | 2026772 | g59817 | i0 | 92 | 1.89873417721519 | 50 | 4 | 94.9 | 0 | 7 | 156 | 284 | 333 | MCF7709931.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Opitutales bacterium] | diamond | 300 | 97.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 28892492 | 28892492 | PRJNA526367_P_NODE_54588_length_163_cov_6.771930_g54378_i0 | PRJNA526367 | 54588 | 163 | 6.77193 | 11.0382459 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 72.4 | 4.39e-13 | NR | MDQ6654929.1 | 2026799 | g54378 | i0 | 73.3 | 1.73006134969325 | 45 | 12 | 82.8 | 0 | 8 | 142 | 561 | 605 | MDQ6654929.1 dockerin type I repeat-containing protein [Verrucomicrobiota bacterium] | diamond | 282 | 72.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28987618 | 28987618 | PRJNA526367_P_NODE_54968_length_163_cov_3.385965_g54758_i0 | PRJNA526367 | 54968 | 163 | 3.385965 | 5.51912295 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 98.6 | 1.62e-24 | NR | PAZ03298.1 | 1982317 | g54758 | i0 | 94.1 | 3.75460122699387 | 51 | 3 | 93.9 | 0 | 6 | 158 | 59 | 109 | PAZ03298.1 MAG: hypothetical protein CAK89_02080, partial [Opitutia bacterium AMD-G3] | diamond | 612 | 98.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium AMD-G3 | ||||
| 29919547 | 29919547 | PRJNA526367_P_NODE_20911_length_324_cov_2.360000_g20702_i0 | PRJNA526367 | 20911 | 324 | 2.36 | 7.6464 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 49.7 | 3.57e-4 | NR | MFM1769552.1 | 2026799 | g20702 | i0 | 70 | 0.537037037037037 | 30 | 9 | 27.8 | 0 | 98 | 9 | 62 | 91 | MFM1769552.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 174 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30835661 | 30835661 | PRJNA526367_P_NODE_64694_length_152_cov_5.330097_g64484_i0 | PRJNA526367 | 64694 | 152 | 5.330097 | 8.10174744 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 92.8 | 2.2e-20 | NR | NBS05292.1 | 2026799 | g64484 | i0 | 93.8 | 1.89473684210526 | 48 | 3 | 94.7 | 0 | 3 | 146 | 294 | 341 | NBS05292.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 288 | 92.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31499644 | 31499644 | PRJNA526367_P_NODE_63796_length_153_cov_5.480769_g63586_i0 | PRJNA526367 | 63796 | 153 | 5.480769 | 8.38557657 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 97.8 | 5.61e-23 | NR | MDF1737661.1 | 2026801 | g63586 | i0 | 89.6 | 0.941176470588235 | 48 | 5 | 94.1 | 0 | 9 | 152 | 96 | 143 | MDF1737661.1 alpha/beta hydrolase-fold protein [Verrucomicrobiales bacterium] | diamond | 144 | 97.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32480430 | 32480430 | PRJNA526367_P_NODE_8979_length_324_cov_3.858182_g8770_i0 | PRJNA526367 | 8979 | 324 | 3.858182 | 12.50050968 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 65.9 | 7.35e-10 | NR | MCX6937266.1 | 2026799 | g8770 | i0 | 96.7 | 0.583333333333333 | 30 | 1 | 27.8 | 0 | 98 | 9 | 631 | 660 | MCX6937266.1 VWA domain-containing protein [Verrucomicrobiota bacterium] | diamond | 189 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32621758 | 32621758 | PRJNA526367_P_NODE_38980_length_184_cov_12.237037_g38770_i0 | PRJNA526367 | 38980 | 184 | 12.237037 | 22.51614808 | Prosthecobacter | 48463 | Bacteria | Bacteria | 73.6 | 2.32e-13 | NR | WP_294227521.1 | 1965333 | g38770 | i0 | 59.4 | 7.30434782608696 | 64 | 21 | 96.2 | 1 | 1 | 177 | 124 | 187 | WP_294227521.1 YHYH protein [Prosthecobacter sp.] | diamond | 1344 | 73.9 | 0.995940460081191 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;