RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA526367", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Eiseniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA526367 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4322998 4322998 PRJNA526367_P_NODE_47184_length_171_cov_4.172131_g46974_i0 PRJNA526367 47184 171 4.172131 7.13434401 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 121 3.87e-23   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g46974 i0 85.47 61.5964912280702 117 15 68 2 36 151 3543640 3543755 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 10533 121 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;