RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA520845", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30108788 30108788 PRJNA520845_P_NODE_188252_length_271_cov_1.535354_g186753_i0 PRJNA520845 188252 271 1.535354 4.16080934 Candidatus Nitrosotenuis chungbukensis 1353246 Archaea Archaea 168 8.32e-49   NR WP_042685813.1 1353246 g186753 i0 94.4 0.996309963099631 90 5 99.6 0 271 2 203 292 WP_042685813.1 OBG GTPase family GTP-binding protein [Candidatus Nitrosotenuis chungbukensis] diamond 270 168 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis chungbukensis
30362096 30362096 PRJNA520845_P_NODE_261452_length_242_cov_0.911243_g259953_i0 PRJNA520845 261452 242 0.911243 2.20520806 Nitrosarchaeum sp. 2026886 Archaea Archaea 84.7 6.12e-17   NR HSA76138.1 2026886 g259953 i0 52.1 0.880165289256198 71 34 88 0 3 215 866 936 HSA76138.1 alpha-ketoglutarate-dependent dioxygenase AlkB [Nitrosarchaeum sp.] diamond 213 84.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
30803927 30803927 PRJNA520845_P_NODE_168374_length_287_cov_1.168224_g166875_i0 PRJNA520845 168374 287 1.168224 3.35280288 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 68.2 6.26e-11   NR HEX6293836.1 2169593 g166875 i0 43.2 0.993031358885017 95 44 99.3 2 286 2 17 101 HEX6293836.1 heavy metal translocating P-type ATPase [Nitrososphaeraceae archaeon] diamond 285 68.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;