RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA520845" and tax_phylum = "Nemertea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nemertea · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA520845 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
489140 489140 PRJNA520845_P_NODE_17521_length_928_cov_6.835088_g16311_i0 PRJNA520845 17521 928 6.835088 63.42961664 Lineus viridis 56195 Nemertea other_Eukaryota 288 3.77e-94   NR ABZ04225.1 56195 g16311 i0 65.3 26.2790948275862 219 74 70.8 1 902 246 1 217 ABZ04225.1 ribosomal protein rpl10a [Lineus viridis] diamond 24387 288 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
1763929 1763929 PRJNA520845_P_NODE_156122_length_298_cov_1.742222_g154623_i0 PRJNA520845 156122 298 1.742222 5.19182156 Cerebratulus lacteus 6221 Nemertea other_Eukaryota 134 9.61e-27   NTclustered gi|584614319|gb|KF887964.1| 6221 g154623 i0 87.719 16.2818791946309 114 14 38 0 183 296 1429 1316 Cerebratulus lacteus alpha-tubulin mRNA, complete cds blastn 4852 134 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Cerebratulus Cerebratulus lacteus
9415361 9415361 PRJNA520845_P_NODE_103708_length_365_cov_1.756849_g102209_i0 PRJNA520845 103708 365 1.756849 6.41249885 Lineus viridis 56195 Nemertea other_Eukaryota 185 3.269999999999999e-42   NTclustered gi|166952380|gb|EU302584.1| 56195 g102209 i0 81.385 5.46849315068493 231 39 63 4 5 233 176 404 Lineus viridis ribosomal protein rps27a mRNA, complete cds blastn 1996 185 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
18339242 18339242 PRJNA520845_P_NODE_116535_length_345_cov_1.661765_g115036_i0 PRJNA520845 116535 345 1.661765 5.73308925 Lineus longissimus 88925 Nemertea other_Eukaryota 54.7 0.009   NTclustered gi|2724570405|ref|XM_064763497.1| 88925 g115036 i0 96.875 0.278260869565217 32 1 9 0 110 141 1721 1690 PREDICTED: Lineus longissimus leucine-rich repeat-containing protein 43-like (LOC135483006), transcript variant X2, mRNA blastn 96 54.7 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
27976953 27976953 PRJNA520845_P_NODE_263125_length_241_cov_1.839286_g261626_i0 PRJNA520845 263125 241 1.839286 4.43267926 Metazoa 33208 Nemertea other_Eukaryota 44.3 0.00991   NR XP_064652967.1 88925 g261626 i0 35.6 5.25311203319502 59 38 73.4 0 36 212 284 342 XP_064652967.1 elongation factor 1-alpha [Lineus longissimus] diamond 1266 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
28656484 28656484 PRJNA520845_P_NODE_76787_length_424_cov_1.025641_g75288_i0 PRJNA520845 76787 424 1.025641 4.34871784 Lineus longissimus 88925 Nemertea other_Eukaryota 206 9.28e-63   NR XP_064635732.1 88925 g75288 i0 66.2 1.96698113207547 139 47 98.3 0 419 3 196 334 XP_064635732.1 protein arginine N-methyltransferase 1-like isoform X2 [Lineus longissimus] diamond 834 206 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
29303077 29303077 PRJNA520845_P_NODE_268349_length_238_cov_2.333333_g266850_i0 PRJNA520845 268349 238 2.333333 5.55333254 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 69.3 1.5e-11   NR XP_064621757.1 88925 g266850 i0 40.5 3.98319327731092 79 47 99.6 0 1 237 333 411 XP_064621757.1 stress-induced-phosphoprotein 1-like isoform X2 [Lineus longissimus] diamond 948 69.3 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
29319325 29319325 PRJNA520845_P_NODE_235489_length_247_cov_0.885057_g233990_i0 PRJNA520845 235489 247 0.885057 2.18609079 Lineus longissimus 88925 Nemertea other_Eukaryota 56.2 6.96e-7   NR XP_064630927.1 88925 g233990 i0 44.3 0.850202429149798 70 36 85 1 232 23 448 514 XP_064630927.1 rho-related BTB domain-containing protein 1-like [Lineus longissimus] diamond 210 56.2 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
30092419 30092419 PRJNA520845_P_NODE_266052_length_241_cov_0.916667_g264553_i0 PRJNA520845 266052 241 0.916667 2.20916747 Metazoa 33208 Nemertea other_Eukaryota 51.6 2.76e-5   NR XP_064642562.1 88925 g264553 i0 53.3 5.75103734439834 45 21 56 0 136 2 168 212 XP_064642562.1 rap1 GTPase-activating protein 1-like isoform X12 [Lineus longissimus] diamond 1386 51.6 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;