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contig_metadata

16 rows where bioproject = "PRJNA520845", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 16 ✖

tax_phylum 1

  • Negarnaviricota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1111388 1111388 PRJNA520845_P_NODE_17301_length_934_cov_2.048780_g16098_i0 PRJNA520845 17301 934 2.04878 19.1356052 Paramyxoviridae 11158 Viruses Viruses 1703 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g16098 i0 99.572 97.9807280513919 934 4 100 0 1 934 5104 4171 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 91514 1720 0.990116279069767 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
3662543 3662543 PRJNA520845_P_NODE_152843_length_302_cov_1.008734_g151344_i0 PRJNA520845 152843 302 1.008734 3.04637668 Viruses 10239 Viruses Viruses 547 2.9399999999999987e-151   NTclustered gi|2177952863|gb|OL452263.1| 2900479 g151344 i0 99.338 3.99668874172185 302 2 100 0 1 302 5061 4760 MAG: Brine shrimp chuvirus 1 isolate CHN/15, complete genome blastn 1207 547 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1
4939640 4939640 PRJNA520845_P_NODE_171344_length_284_cov_2.189573_g169845_i0 PRJNA520845 171344 284 2.189573 6.21838732 Orthorubulavirus 2560195 Viruses Viruses 525 1.2899999999999994e-144   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g169845 i0 100 96.1514084507042 284 0 100 0 1 284 4768 4485 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 27307 525 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
7490160 7490160 PRJNA520845_P_NODE_85186_length_402_cov_1.638298_g83687_i0 PRJNA520845 85186 402 1.638298 6.58595796 Orthorubulavirus 2560195 Viruses Viruses 743 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g83687 i0 100 70.4328358208955 402 0 100 0 1 402 11235 10834 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 28314 743 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8764099 8764099 PRJNA520845_P_NODE_1107_length_2984_cov_3.430436_g919_i0 PRJNA520845 1107 2984 3.430436 102.36421024 Orthorubulavirus 2560195 Viruses Viruses 5450 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g919 i0 99.665 78.2533512064343 2982 8 99 1 1 2982 3022 43 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 233508 5457 0.998717243906909 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8764743 8764743 PRJNA520845_P_NODE_25247_length_765_cov_4.164740_g23862_i0 PRJNA520845 25247 765 4.16474 31.860261 Paramyxoviridae 11158 Viruses Viruses 1408 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g23862 i0 99.869 68.9934640522876 765 1 100 0 1 765 2838 2074 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 52780 1408 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
10692758 10692758 PRJNA520845_P_NODE_16609_length_953_cov_7.012500_g15433_i0 PRJNA520845 16609 953 7.0125 66.829125 brine shrimp chuvirus 1 2900479 Viruses Viruses 97.1 4.39e-15   NTclustered gi|2177952885|gb|OL452274.1| 2900479 g15433 i0 91.549 0.44700944386149 71 5 7 1 1 70 7101 7031 MAG: Brine shrimp chuvirus 1 isolate YC/91, complete genome blastn 426 97.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1
12590839 12590839 PRJNA520845_P_NODE_40870_length_589_cov_3.356589_g39395_i0 PRJNA520845 40870 589 3.356589 19.77030921 Orthorubulavirus 2560195 Viruses Viruses 1083 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g39395 i0 99.83 69.1935483870968 589 1 100 0 1 589 4436 3848 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 40755 1088 0.995404411764706 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
14522309 14522309 PRJNA520845_P_NODE_9632_length_1260_cov_2.516428_g8747_i0 PRJNA520845 9632 1260 2.516428 31.7069928 brine shrimp arlivirus 8 2900383 Viruses Viruses 403 4.95e-135   NR UNI74120.1 2900383 g8747 i0 52.3 0.873809523809524 367 175 87.4 0 46 1146 1 367 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 1101 403 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis
16414529 16414529 PRJNA520845_P_NODE_263853_length_241_cov_1.375000_g262354_i0 PRJNA520845 263853 241 1.375 3.31375 Orthorubulavirus 2560195 Viruses Viruses 446 8.519999999999999e-121   NTclustered gi|1394370381|gb|MH362816.1| 2560580 g262354 i0 100 69 241 0 100 0 1 241 12118 12358 Mammalian orthorubulavirus 5 strain CAN, complete genome blastn 16629 446 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
16414675 16414675 PRJNA520845_P_NODE_50673_length_525_cov_2.274336_g49181_i0 PRJNA520845 50673 525 2.274336 11.940264 Orthorubulavirus 2560195 Viruses Viruses 970 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g49181 i0 100 82.232380952381 525 0 100 0 1 525 7760 8284 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 43172 970 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
17689836 17689836 PRJNA520845_P_NODE_63314_length_468_cov_1.405063_g61815_i0 PRJNA520845 63314 468 1.405063 6.57569484 Orthorubulavirus 2560195 Viruses Viruses 859 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g61815 i0 99.786 82.9786324786325 468 1 100 0 1 468 7189 6722 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 38834 865 0.993063583815029 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
22165771 22165771 PRJNA520845_P_NODE_167758_length_287_cov_1.799065_g166259_i0 PRJNA520845 167758 287 1.799065 5.16331655 Orthorubulavirus parotitidis 3052560 Viruses Viruses 52.8 0.027   NTclustered gi|1058397345|gb|KX690611.1| 1384673 g166259 i0 100 0.0975609756097561 28 0 10 0 40 67 112 85 Mumps virus genotype F strain MuVi/Sichuan.CHN/23.12/2[F] small hydrophobic protein (SH) gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus parotitidis
24063875 24063875 PRJNA520845_P_NODE_60919_length_477_cov_2.207921_g59421_i0 PRJNA520845 60919 477 2.207921 10.53178317 Paramyxoviridae 11158 Viruses Viruses 870 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g59421 i0 99.581 83.9832285115304 477 2 100 0 1 477 6695 6219 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 40060 876 0.993150684931507 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
27456659 27456659 PRJNA520845_P_NODE_138883_length_317_cov_1.262295_g137384_i0 PRJNA520845 138883 317 1.262295 4.00147515 Rhizoctonia cerealis bunyavirus 3068840 Viruses Viruses 46.6 0.00414   NR WMI40150.1 3068840 g137384 i0 33.3 0.851735015772871 90 58 85.2 2 289 20 1495 1582 WMI40150.1 MAG: RNA-dependent RNA polymerase [Rhizoctonia cerealis bunyavirus] diamond 270 46.6 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Rhizoctonia cerealis bunyavirus
28024850 28024850 PRJNA520845_P_NODE_10745_length_1195_cov_2.755793_g8747_i1 PRJNA520845 10745 1195 2.755793 32.93172635 brine shrimp arlivirus 8 2900383 Viruses Viruses 397 5.929999999999999e-133   NR UNI74120.1 2900383 g8747 i1 52.6 0.901255230125523 359 170 90.1 0 46 1122 1 359 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 1077 397 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;