RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA520845" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3662619 3662619 PRJNA520845_P_NODE_167443_length_288_cov_1.032558_g165944_i0 PRJNA520845 167443 288 1.032558 2.97376704 root 1 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|2686256135|emb|OZ008438.1| 2587225 g165944 i0 100 2.76388888888889 29 0 10 0 179 207 3457 3429 Apocryptovirus neoptolemus Segment 2, complete CDS blastn 796 54.7 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
10692798 10692798 PRJNA520845_P_NODE_167549_length_287_cov_4.719626_g166050_i0 PRJNA520845 167549 287 4.719626 13.54532662 Mitovirus sp. 2587224 Viruses Viruses 174 5.4299999999999997e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g166050 i0 94.643 3.27177700348432 112 6 39 0 172 283 112 1 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 939 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
15792294 15792294 PRJNA520845_P_NODE_191473_length_268_cov_7.035897_g189974_i0 PRJNA520845 191473 268 7.035897 18.85620396 Mitovirus sp. 2587224 Viruses Viruses 121 6.63e-23   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g189974 i0 92.771 0.309701492537313 83 6 31 0 18 100 29 111 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 83 121 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;