RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA520845" and tax_phylum = "Candidatus Thorarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4319084 4319084 PRJNA520845_P_NODE_47704_length_543_cov_1.482979_g46215_i0 PRJNA520845 47704 543 1.482979 8.05257597 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 291 4.15e-93   NR MBN2228639.1 2053491 g46215 i0 70 0.994475138121547 180 54 99.4 0 541 2 216 395 MBN2228639.1 DDE-type integrase/transposase/recombinase [Candidatus Thorarchaeota archaeon] diamond 540 291 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30709089 30709089 PRJNA520845_P_NODE_247794_length_245_cov_0.895349_g246295_i0 PRJNA520845 247794 245 0.895349 2.19360505 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 91.7 2.24e-19   NR MBN2228639.1 2053491 g246295 i0 53.8 0.979591836734694 80 37 98 0 6 245 168 247 MBN2228639.1 DDE-type integrase/transposase/recombinase [Candidatus Thorarchaeota archaeon] diamond 240 91.7 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
31246341 31246341 PRJNA520845_P_NODE_231155_length_248_cov_0.880000_g229656_i0 PRJNA520845 231155 248 0.88 2.1824 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 48.5 1.05e-4   NR MFO7837445.1 2053491 g229656 i0 42.9 0.592741935483871 49 28 59.3 0 244 98 79 127 MFO7837445.1 pyrimidine dimer DNA glycosylase/endonuclease V [Candidatus Thorarchaeota archaeon] diamond 147 48.5 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;