RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA520845" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26602238 26602238 PRJNA520845_P_NODE_40161_length_595_cov_3.670498_g38686_i0 PRJNA520845 40161 595 3.670498 21.8394631 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 180 1.05e-49   NR MBD68911.1 2026781 g38686 i0 54.5 4.71932773109244 156 71 78.7 0 540 73 421 576 MBD68911.1 transketolase [Candidatus Poribacteria bacterium] diamond 2808 180 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32084070 32084070 PRJNA520845_P_NODE_164638_length_290_cov_1.161290_g163139_i0 PRJNA520845 164638 290 1.16129 3.367741 Pseudomonadati 3379134 Bacteria Bacteria 53.5 1.05e-5   NR MCY4404684.1 2026781 g163139 i0 57.1 0.879310344827586 42 18 43.4 0 4 129 587 628 MCY4404684.1 WD40 repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 255 53.9 0.992578849721707 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;