contig_metadata
4 rows where bioproject = "PRJNA520845" and tax_phylum = "Balneolota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28751017 | 28751017 | PRJNA520845_P_NODE_229327_length_248_cov_0.880000_g227828_i0 | PRJNA520845 | 229327 | 248 | 0.88 | 2.1824 | Fodinibius salicampi | 1920655 | Bacteria | Bacteria | 42.4 | 0.0456 | NR | WP_265791379.1 | 1920655 | g227828 | i0 | 41 | 0.943548387096774 | 78 | 40 | 94.4 | 2 | 14 | 247 | 110 | 181 | WP_265791379.1 hypothetical protein [Fodinibius salicampi] | diamond | 234 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Balneolota | Balneolia | Balneolales | Balneolaceae | Fodinibius | Fodinibius salicampi | |
| 28940665 | 28940665 | PRJNA520845_P_NODE_194668_length_266_cov_1.341969_g193169_i0 | PRJNA520845 | 194668 | 266 | 1.341969 | 3.56963754 | Balneolia bacterium | 2094027 | Bacteria | Bacteria | 64.7 | 5.67e-10 | NR | MCH8557723.1 | 2094027 | g193169 | i0 | 45.5 | 3.24812030075188 | 55 | 30 | 62 | 0 | 165 | 1 | 23 | 77 | MCH8557723.1 tetratricopeptide repeat protein [Balneolia bacterium] | diamond | 864 | 64.7 | 1 | Bacteria | FCB group | Pseudomonadati | Balneolota | Balneolia | Balneolia bacterium | ||||
| 31830802 | 31830802 | PRJNA520845_P_NODE_201177_length_261_cov_0.989362_g199678_i0 | PRJNA520845 | 201177 | 261 | 0.989362 | 2.58223482 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 85.1 | 1.03e-17 | NR | AXI99865.1 | 1457365 | g199678 | i0 | 87.8 | 4.72413793103448 | 41 | 5 | 47.1 | 0 | 123 | 1 | 1 | 41 | AXI99865.1 DNA (cytosine-5)-methyltransferase 1 [Cyclonatronum proteinivorum] | diamond | 1233 | 85.5 | 0.9953216374269 | Bacteria | FCB group | Pseudomonadati | Balneolota | Balneolia | Balneolales | Cyclonatronaceae | Cyclonatronum | Cyclonatronum proteinivorum | |
| 32637738 | 32637738 | PRJNA520845_P_NODE_260320_length_242_cov_0.911243_g258821_i0 | PRJNA520845 | 260320 | 242 | 0.911243 | 2.20520806 | Balneola vulgaris | 287535 | Bacteria | Bacteria | 90.1 | 5.55e-19 | NR | WP_018127364.1 | 287535 | g258821 | i0 | 57.9 | 4.7603305785124 | 76 | 32 | 94.2 | 0 | 14 | 241 | 217 | 292 | WP_018127364.1 acetyl-CoA C-acyltransferase [Balneola vulgaris] | diamond | 1152 | 90.1 | 1 | Bacteria | FCB group | Pseudomonadati | Balneolota | Balneolia | Balneolales | Balneolaceae | Balneola | Balneola vulgaris |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;