RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA520845", tax_kingdom = "Metazoa" and tax_phylum = "Placozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Placozoa · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA520845 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8141755 8141755 PRJNA520845_P_NODE_156947_length_297_cov_2.098214_g155448_i0 PRJNA520845 156947 297 2.098214 6.23169558 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 121 7.46e-23   NTclustered gi|196005728|ref|XM_002112695.1| 10228 g155448 i0 77.103 2.87542087542088 214 45 71 4 1 212 640 851 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_26014), partial mRNA blastn 854 121 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
9420471 9420471 PRJNA520845_P_NODE_49288_length_533_cov_2.330435_g47797_i0 PRJNA520845 49288 533 2.330435 12.42121855 Placozoa sp. H4 1034858 Placozoa other_Eukaryota 251 7.25e-82   NR AGH70213.1 1034858 g47797 i0 65.5 6.97373358348968 177 51 99.6 2 532 2 14 180 AGH70213.1 40S ribosomal protein SA, partial [Placozoa sp. H4] diamond 3717 251 1 Eukaryota Opisthokonta Metazoa Placozoa         Placozoa sp. H4
9421304 9421304 PRJNA520845_P_NODE_83328_length_407_cov_0.982036_g81829_i0 PRJNA520845 83328 407 0.982036 3.99688652 Metazoa 33208 Placozoa other_Eukaryota 218 5.19e-66   NR XP_002117794.1 10228 g81829 i0 81.3 18.8255528255528 128 24 94.3 0 24 407 22 149 XP_002117794.1 uncharacterized protein TRIADDRAFT_63434 [Trichoplax adhaerens] diamond 7662 219 0.995433789954338 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
18343401 18343401 PRJNA520845_P_NODE_29555_length_702_cov_6.572337_g28127_i0 PRJNA520845 29555 702 6.572337 46.13780574 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 259 3.85e-64   NTclustered gi|196003261|ref|XM_002111462.1| 10228 g28127 i0 83.158 4.38034188034188 285 46 40 2 122 405 120 403 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_35819), mRNA blastn 3075 259 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
27266993 27266993 PRJNA520845_P_NODE_59003_length_485_cov_2.584951_g57507_i0 PRJNA520845 59003 485 2.584951 12.53701235 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 53.1 7.44e-5   NR XP_002109790.1 10228 g57507 i0 27.2 0.909278350515464 147 97 90.3 4 439 2 61 198 XP_002109790.1 uncharacterized protein TRIADDRAFT_53030 [Trichoplax adhaerens] diamond 441 53.1 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
27661405 27661405 PRJNA520845_P_NODE_213264_length_251_cov_1.297753_g211765_i0 PRJNA520845 213264 251 1.297753 3.25736003 Metazoa 33208 Placozoa other_Eukaryota 73.2 4.72e-13   NR XP_002108614.1 10228 g211765 i0 45.2 6.01195219123506 84 44 99.2 2 2 250 54 136 XP_002108614.1 uncharacterized protein TRIADDRAFT_18938 [Trichoplax adhaerens] diamond 1509 73.9 0.990527740189445 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
27772439 27772439 PRJNA520845_P_NODE_177384_length_280_cov_1.115942_g175885_i0 PRJNA520845 177384 280 1.115942 3.1246376 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 70.9 6.83e-12   NR XP_002111189.1 10228 g175885 i0 37.8 0.964285714285714 90 56 96.4 0 270 1 317 406 XP_002111189.1 uncharacterized protein TRIADDRAFT_54892 [Trichoplax adhaerens] diamond 270 70.9 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
29887879 29887879 PRJNA520845_P_NODE_232871_length_247_cov_2.844828_g231372_i0 PRJNA520845 232871 247 2.844828 7.02672516 Trichoplax sp. H2 287889 Placozoa other_Eukaryota 48.5 3.74e-4   NR RDD46371.1 287889 g231372 i0 44.9 0.595141700404858 49 26 59.5 1 40 186 1608 1655 RDD46371.1 Proprotein convertase subtilisin/kexin type 5 [Trichoplax sp. H2] diamond 147 48.5 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax sp. H2
32606496 32606496 PRJNA520845_P_NODE_237840_length_247_cov_0.879310_g236341_i0 PRJNA520845 237840 247 0.87931 2.1718957 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 134 2.05e-38   NR XP_002116073.1 10228 g236341 i0 78 0.995951417004049 82 18 99.6 0 246 1 22 103 XP_002116073.1 expressed hypothetical protein [Trichoplax adhaerens] diamond 246 134 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;