RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA520845", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27488158 27488158 PRJNA520845_P_NODE_262923_length_242_cov_0.869822_g261424_i0 PRJNA520845 262923 242 0.869822 2.10496924 Armatimonadota bacterium 2033014 Bacteria Bacteria 53.1 2.44e-7   NR MBC7805247.1 2033014 g261424 i0 75 0.694214876033058 28 7 34.7 0 1 84 19 46 MBC7805247.1 hypothetical protein [Armatimonadota bacterium] diamond 168 53.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29603157 29603157 PRJNA520845_P_NODE_168150_length_287_cov_1.415888_g166651_i0 PRJNA520845 168150 287 1.415888 4.06359856 Armatimonadota bacterium 2033014 Bacteria Bacteria 95.5 1.08e-21   NR MBI2264303.1 2033014 g166651 i0 51.6 0.993031358885017 95 46 99.3 0 286 2 79 173 MBI2264303.1 C39 family peptidase [Armatimonadota bacterium] diamond 285 95.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;