RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA520845", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29492542 29492542 PRJNA520845_P_NODE_88730_length_394_cov_1.439252_g87231_i0 PRJNA520845 88730 394 1.439252 5.67065288 Pseudomonadati 3379134 Bacteria Bacteria 50.1 5.72e-4   NR OGV71724.1 1798577 g87231 i0 36.1 1.48477157360406 97 59 73.9 3 70 360 1079 1172 OGV71724.1 MAG: hypothetical protein A3K18_01925 [Lentisphaerae bacterium RIFOXYA12_64_32] diamond 585 50.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium RIFOXYA12_64_32
31752367 31752367 PRJNA520845_P_NODE_93357_length_384_cov_2.025723_g91858_i0 PRJNA520845 93357 384 2.025723 7.77877632 Lentisphaerales bacterium 2448604 Bacteria Bacteria 122 7.33e-30   NR TFH14283.1 2448604 g91858 i0 51.6 0.984375 126 57 96.1 3 384 16 199 323 TFH14283.1 MAG: hypothetical protein E4H02_10190 [Lentisphaerales bacterium] diamond 378 122 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales     Lentisphaerales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;