RNAquarium Metadata Server
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contig_metadata

15 rows where bioproject = "PRJNA520845", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 15 ✖

tax_clade 1

  • Metamonada · 15 ✖

bioproject 1

  • PRJNA520845 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19616225 19616225 PRJNA520845_P_NODE_212156_length_252_cov_1.150838_g210657_i0 PRJNA520845 212156 252 1.150838 2.90011176 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 56.5 0.002   NTclustered gi|2794867511|ref|XM_067917056.1| 135588 g210657 i0 88 0.198412698412698 50 3 19 2 96 142 623 574 Histomonas meleagridis C2 domain containing protein (GO595_003976), partial mRNA blastn 50 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
26824304 26824304 PRJNA520845_P_NODE_60561_length_479_cov_1.371921_g59065_i0 PRJNA520845 60561 479 1.371921 6.57150159 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 71.2 3.04e-12   NR XP_001308190.1 412133 g59065 i0 61.5 0.325678496868476 52 19 32.6 1 226 71 81 131 XP_001308190.1 Macro Poa1p-like domain-containing protein [Trichomonas vaginalis G3] diamond 156 71.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27235318 27235318 PRJNA520845_P_NODE_202703_length_259_cov_1.655914_g201204_i0 PRJNA520845 202703 259 1.655914 4.28881726 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 87.4 3e-19   NR XP_068360038.1 1144522 g201204 i0 51.8 0.984555984555985 85 41 98.5 0 257 3 87 171 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 255 87.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27677810 27677810 PRJNA520845_P_NODE_206484_length_256_cov_1.683060_g204985_i0 PRJNA520845 206484 256 1.68306 4.3086336 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 63.9 1.4e-9   NR KAK8834991.1 1915356 g204985 i0 47.9 8.21484375 71 34 80.9 2 254 48 161 230 KAK8834991.1 hypothetical protein M9Y10_019967 [Tritrichomonas musculus] diamond 2103 63.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
28008741 28008741 PRJNA520845_P_NODE_120005_length_340_cov_2.749064_g118506_i0 PRJNA520845 120005 340 2.749064 9.3468176 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.5 3.01e-7   NR XP_068360157.1 1144522 g118506 i0 42 2.54117647058824 50 29 44.1 0 329 180 171 220 XP_068360157.1 CAMK family protein kinase [Tritrichomonas foetus] diamond 864 58.9 0.99320882852292 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28292585 28292585 PRJNA520845_P_NODE_122046_length_338_cov_1.101887_g120547_i0 PRJNA520845 122046 338 1.101887 3.72437806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.00647   NR XP_001314726.1 412133 g120547 i0 42.2 1.11834319526627 45 22 39.9 1 139 5 51 91 XP_001314726.1 positive regulation of ATP-dependent microtubule motor activity, plus-end-directed [Trichomonas vaginalis G3] diamond 378 44.3 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28845633 28845633 PRJNA520845_P_NODE_72308_length_437_cov_1.472527_g70809_i0 PRJNA520845 72308 437 1.472527 6.43494299 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 57.8 1.32e-6   NR XP_001324459.1 412133 g70809 i0 43.5 0.473684210526316 69 37 46.7 2 334 131 185 252 XP_001324459.1 serine-type endopeptidase protein [Trichomonas vaginalis G3] diamond 207 57.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29792863 29792863 PRJNA520845_P_NODE_68851_length_448_cov_1.482667_g67352_i0 PRJNA520845 68851 448 1.482667 6.64234816 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 67 7.26e-10   NR XP_067775396.1 135588 g67352 i0 41.8 0.890625 67 38 44.9 1 201 1 114 179 XP_067775396.1 WD repeat protein [Histomonas meleagridis] diamond 399 67 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30803938 30803938 PRJNA520845_P_NODE_187734_length_271_cov_3.621212_g186235_i0 PRJNA520845 187734 271 3.621212 9.81348452 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 62.8 3.63e-9   NR XP_067775396.1 135588 g186235 i0 41.8 1.4280442804428 67 37 74.2 2 271 71 169 233 XP_067775396.1 WD repeat protein [Histomonas meleagridis] diamond 387 62.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30867125 30867125 PRJNA520845_P_NODE_235834_length_247_cov_0.885057_g234335_i0 PRJNA520845 235834 247 0.885057 2.18609079 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 62 4.88e-9   NR XP_001324863.1 412133 g234335 i0 43 0.959514170040486 79 40 89.9 2 242 21 118 196 XP_001324863.1 protein polyubiquitination [Trichomonas vaginalis G3] diamond 237 62 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31531205 31531205 PRJNA520845_P_NODE_237196_length_247_cov_0.885057_g235697_i0 PRJNA520845 237196 247 0.885057 2.18609079 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 48.1 1.18e-4   NR XP_051086197.1 412133 g235697 i0 33.8 2.69635627530364 74 41 80.2 2 246 49 4 77 XP_051086197.1 pantothenate kinase protein, partial [Trichomonas vaginalis G3] diamond 666 48.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31847267 31847267 PRJNA520845_P_NODE_76917_length_423_cov_2.200000_g75418_i0 PRJNA520845 76917 423 2.2 9.306 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 44.7 0.0298   NR XP_068356400.1 1144522 g75418 i0 37.3 0.475177304964539 67 31 45.4 2 422 231 69 127 XP_068356400.1 Ras-related protein Rab-22A [Tritrichomonas foetus] diamond 201 44.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32322209 32322209 PRJNA520845_P_NODE_190559_length_269_cov_1.571429_g189060_i0 PRJNA520845 190559 269 1.571429 4.22714401 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 50.8 7.05e-5   NR XP_068369368.1 1144522 g189060 i0 50 0.62453531598513 56 27 62.5 1 100 267 13 67 XP_068369368.1 CAMK family protein kinase [Tritrichomonas foetus] diamond 168 50.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32448704 32448704 PRJNA520845_P_NODE_167399_length_288_cov_1.074419_g165900_i0 PRJNA520845 167399 288 1.074419 3.09432672 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 52.4 1.31e-5   NR XP_001304177.1 412133 g165900 i0 54.5 1.23958333333333 33 15 34.4 0 129 31 71 103 XP_001304177.1 GTPase protein [Trichomonas vaginalis G3] diamond 357 52.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32575285 32575285 PRJNA520845_P_NODE_263179_length_241_cov_1.833333_g261680_i0 PRJNA520845 263179 241 1.833333 4.41833253 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 72.8 9.3e-13   NR XP_068348869.1 1144522 g261680 i0 44.9 6.87136929460581 78 43 97.1 0 237 4 235 312 XP_068348869.1 uncharacterized protein TRFO_10384 [Tritrichomonas foetus] diamond 1656 72.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;