RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA520845", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4316405 4316405 PRJNA520845_P_NODE_187144_length_272_cov_1.376884_g185645_i0 PRJNA520845 187144 272 1.376884 3.74512448 Bacteria 2 Bacteria Bacteria 138 1.15e-35   NR OGC77223.1 1802786 g185645 i0 77.8 1.98529411764706 90 20 99.3 0 270 1 497 586 OGC77223.1 MAG: oligopeptidase B [candidate division Zixibacteria bacterium RBG_16_50_21] diamond 540 138 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         candidate division Zixibacteria bacterium RBG_16_50_21
26919109 26919109 PRJNA520845_P_NODE_238362_length_246_cov_1.687861_g236863_i0 PRJNA520845 238362 246 1.687861 4.15213806 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 55.5 1.21e-6   NR MDD3732321.1 2053527 g236863 i0 56.3 0.585365853658537 48 21 58.5 0 48 191 44 91 MDD3732321.1 serpin family protein [Candidatus Zixiibacteriota bacterium] diamond 144 55.5 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
30488103 30488103 PRJNA520845_P_NODE_72513_length_436_cov_2.168044_g71014_i0 PRJNA520845 72513 436 2.168044 9.45267184 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 159 3.71e-42   NR MDD4050449.1 2053527 g71014 i0 54.2 4.86467889908257 142 56 93.6 3 413 6 299 437 MDD4050449.1 trypsin-like peptidase domain-containing protein [Candidatus Zixiibacteriota bacterium] diamond 2121 159 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;