RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA520845", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6867935 6867935 PRJNA520845_P_NODE_212786_length_251_cov_1.505618_g211287_i0 PRJNA520845 212786 251 1.505618 3.77910118 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 52.8 0.023   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g211287 i0 100 0.111553784860558 28 0 11 0 76 103 4067553 4067526 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
24716915 24716915 PRJNA520845_P_NODE_238220_length_246_cov_1.780347_g236721_i0 PRJNA520845 238220 246 1.780347 4.37965362 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 52.8 0.022   NTclustered gi|2575820357|emb|OY730476.1| 2053570 g236721 i0 96.774 0.126016260162602 31 1 13 0 211 241 4268302 4268272 MAG: Candidatus Latescibacteria bacterium isolate 667a1def-a863-4bf2-9b98-94036fb31650 genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;