RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA520845", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27171921 27171921 PRJNA520845_P_NODE_44082_length_566_cov_2.876268_g42599_i0 PRJNA520845 44082 566 2.876268 16.27967688 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.9 0.00324   NR MDR3548022.1 2053589 g42599 i0 21.4 0.545936395759717 103 81 54.6 0 512 204 19 121 MDR3548022.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 309 48.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27362059 27362059 PRJNA520845_P_NODE_90163_length_391_cov_1.452830_g88664_i0 PRJNA520845 90163 391 1.45283 5.6805653 Minisyncoccota bacterium 2053589 Bacteria Bacteria 77.4 1.01e-15   NR MDR3572201.1 2053589 g88664 i0 88.4 0.329923273657289 43 5 33 0 1 129 46 88 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 129 77.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;