RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA520845", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29871496 29871496 PRJNA520845_P_NODE_148671_length_306_cov_1.618026_g147172_i0 PRJNA520845 148671 306 1.618026 4.95115956 Bacteria 2 Bacteria Bacteria 72.8 2.26e-12   NR MBW8058413.1 2072417 g147172 i0 40.9 1.79411764705882 88 39 86.3 1 31 294 51 125 MBW8058413.1 PAS domain S-box protein [Candidatus Methylomirabilota bacterium] diamond 549 73.2 0.994535519125683 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30014150 30014150 PRJNA520845_P_NODE_164491_length_290_cov_1.304147_g162992_i0 PRJNA520845 164491 290 1.304147 3.7820263 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 58.9 1.31e-7   NR HSL17740.1 2072417 g162992 i0 38.3 2.94827586206897 94 48 90 3 6 266 33 123 HSL17740.1 S8 family serine peptidase [Candidatus Methylomirabilota bacterium] diamond 855 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31151182 31151182 PRJNA520845_P_NODE_96055_length_379_cov_1.500000_g94556_i0 PRJNA520845 96055 379 1.5 5.685 Candidatus Methylomirabilis lanthanidiphila 2211376 Bacteria Bacteria 58.2 6.33e-7   NR MBZ0168848.1 2211376 g94556 i0 37.9 1.04485488126649 66 41 52.2 0 11 208 337 402 MBZ0168848.1 vanadium-dependent haloperoxidase [Candidatus Methylomirabilis lanthanidiphila] diamond 396 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis lanthanidiphila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;