RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA515078", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA515078 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27203388 27203388 PRJNA515078_P_NODE_6142_length_380_cov_1.586006_g5909_i0 PRJNA515078 6142 380 1.586006 6.0268228 Thermoproteota archaeon 2056631 Archaea Archaea 141 1.65e-37   NR MFC1751912.1 2056631 g5909 i0 53.9 1.01052631578947 128 57 99.5 1 1 378 252 379 MFC1751912.1 DUF1015 domain-containing protein [Thermoproteota archaeon] diamond 384 141 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30661278 30661278 PRJNA515078_P_NODE_33513_length_152_cov_1.356522_g33280_i0 PRJNA515078 33513 152 1.356522 2.06191344 Archaea 2157 Archaea Archaea 43.9 0.0042   NR WP_125742014.1 498846 g33280 i0 44 4.91447368421053 50 28 98.7 0 3 152 27 76 WP_125742014.1 peptide chain release factor aRF-1 [Candidatus Korarchaeum cryptofilum] diamond 747 43.9 1 Archaea   Thermoproteati Thermoproteota Candidatus Korarchaeia Candidatus Korarchaeales Candidatus Korarchaeaceae Candidatus Korarchaeum Candidatus Korarchaeum cryptofilum
32873533 32873533 PRJNA515078_P_NODE_34120_length_151_cov_1.026316_g33887_i0 PRJNA515078 34120 151 1.026316 1.54973716 Staphylothermus 2279 Archaea Archaea 46.6 1.14e-4   NR MEM1661691.1 2184738 g33887 i0 43.2 3.39735099337748 44 25 87.4 0 139 8 67 110 MEM1661691.1 DNA-binding protein [Desulfurococcaceae archaeon] diamond 513 47 0.991489361702128 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;