RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA515078", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA515078 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11314093 11314093 PRJNA515078_P_NODE_12729_length_249_cov_1.330189_g12496_i0 PRJNA515078 12729 249 1.330189 3.31217061 Nitrosarchaeum sp. 2026886 Archaea Archaea 100 2.5300000000000003e-22   NR MFB5612793.1 2026886 g12496 i0 64.6 1.97590361445783 82 29 98.8 0 248 3 514 595 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 492 100 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
25337332 25337332 PRJNA515078_P_NODE_19480_length_197_cov_0.925000_g19247_i0 PRJNA515078 19480 197 0.925 1.82225 Nitrosopumilus sp. 2024843 Archaea Archaea 58.2 7.34e-8   NR MBA4717734.1 2024843 g19247 i0 66.7 2.01015228426396 42 13 64 1 175 50 34 74 MBA4717734.1 SBBP repeat-containing protein [Nitrosopumilus sp.] diamond 396 58.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;