RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA515078" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA515078 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26760559 26760559 PRJNA515078_P_NODE_17221_length_210_cov_1.768786_g16988_i0 PRJNA515078 17221 210 1.768786 3.7144506 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0168   NR ETO13815.1 46433 g16988 i0 33.8 2.02857142857143 68 41 91.4 1 208 17 228 295 ETO13815.1 hypothetical protein RFI_23552 [Reticulomyxa filosa] diamond 426 43.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
26824170 26824170 PRJNA515078_P_NODE_34181_length_151_cov_1.026316_g33948_i0 PRJNA515078 34181 151 1.026316 1.54973716 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 42 0.0185   NR ETO05016.1 46433 g33948 i0 45.9 0.735099337748344 37 19 71.5 1 122 15 95 131 ETO05016.1 SMP-30/gluconolaconase/LRE domain-containing protein, partial [Reticulomyxa filosa] diamond 111 42 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
26902917 26902917 PRJNA515078_P_NODE_31181_length_157_cov_1.291667_g30948_i0 PRJNA515078 31181 157 1.291667 2.02791719 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.4 7.43e-10   NR AJD73542.1 1415197 g30948 i0 55.1 6.61146496815287 49 22 93.6 0 9 155 171 219 AJD73542.1 actin, partial [Foraminifera sp. chocolate silver saccamminid] diamond 1038 62.8 0.993630573248408 Eukaryota Sar   Foraminifera         Foraminifera sp. chocolate silver saccamminid
28545537 28545537 PRJNA515078_P_NODE_22207_length_184_cov_1.299320_g21974_i0 PRJNA515078 22207 184 1.29932 2.3907488 Ochromonadales 98652 SAR_Eukaryotes SAR_Eukaryotes 52.8 4.94e-6   NR ETO33788.1 46433 g21974 i0 36.1 2.28260869565217 83 30 97.8 2 183 4 187 269 ETO33788.1 hypothetical protein RFI_03313 [Reticulomyxa filosa] diamond 420 53.1 0.994350282485876 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28561633 28561633 PRJNA515078_P_NODE_29807_length_160_cov_1.268293_g29574_i0 PRJNA515078 29807 160 1.268293 2.0292688 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 58.9 2.36e-8   NR ETO17306.1 46433 g29574 i0 52.8 0.99375 53 25 99.4 0 159 1 361 413 ETO17306.1 hypothetical protein RFI_20020 [Reticulomyxa filosa] diamond 159 58.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31214184 31214184 PRJNA515078_P_NODE_33955_length_151_cov_1.368421_g33722_i0 PRJNA515078 33955 151 1.368421 2.06631571 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 42 0.0202   NR ETO34182.1 46433 g33722 i0 39.5 0.854304635761589 43 26 85.4 0 11 139 97 139 ETO34182.1 hypothetical protein RFI_02911, partial [Reticulomyxa filosa] diamond 129 42 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32258906 32258906 PRJNA515078_P_NODE_31798_length_156_cov_0.924370_g31565_i0 PRJNA515078 31798 156 0.92437 1.4420172 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.8 4.52e-9   NR ETO30587.1 46433 g31565 i0 52.9 1.92307692307692 51 24 98.1 0 155 3 237 287 ETO30587.1 hypothetical protein RFI_06533 [Reticulomyxa filosa] diamond 300 60.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32590414 32590414 PRJNA515078_P_NODE_29839_length_160_cov_1.260163_g29606_i0 PRJNA515078 29839 160 1.260163 2.0162608 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 70.1 8.06e-14   NR ETO26371.1 46433 g29606 i0 63.5 10.8375 52 19 97.5 0 5 160 52 103 ETO26371.1 maleylacetoacetate isomerase isoform 1, partial [Reticulomyxa filosa] diamond 1734 70.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;