RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA515078", tax_phylum = "Candidatus Sysuimicrobiota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 1 ✖

tax_phylum 1

  • Candidatus Sysuimicrobiota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA515078 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28213920 28213920 PRJNA515078_P_NODE_12366_length_253_cov_1.435185_g12133_i0 PRJNA515078 12366 253 1.435185 3.63101805 Candidatus Fervidifonticultor secundus 3378013 Bacteria Bacteria 58.2 1.43e-7   NR MDR7533331.1 3378013 g12133 i0 57.1 1.41106719367589 56 23 66.4 1 251 84 42 96 MDR7533331.1 molecular chaperone DnaJ [Candidatus Fervidifonticultor secundus] diamond 357 58.2 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Humicultoraceae Candidatus Fervidifonticultor Candidatus Fervidifonticultor secundus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;