RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA515078" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA515078 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27661369 27661369 PRJNA515078_P_NODE_10164_length_283_cov_2.634146_g9931_i0 PRJNA515078 10164 283 2.634146 7.45463318 root 1 Root_unresolved Root_unresolved 87.4 2e-19   NR OGE84294.1 1817827 g9931 i0 45.5 2.83038869257951 88 47 92.2 1 276 16 1 88 OGE84294.1 MAG: hypothetical protein A2846_02025 [Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_49_9] diamond 801 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_49_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;