contig_metadata
27 rows where bioproject = "PRJNA515078", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6214480 | 6214480 | PRJNA515078_P_NODE_825_length_1043_cov_4.155070_g712_i0 | PRJNA515078 | 825 | 1043 | 4.15507 | 43.3373801 | Bdellovibrio | 958 | Bacteria | Bacteria | 231 | 1.2699999999999995e-55 | NTclustered | gi|2800927921|gb|CP168969.1| | 959 | g712 | i0 | 76.238 | 40.5474592521572 | 505 | 80 | 45 | 20 | 1 | 471 | 828992 | 829490 | Bdellovibrio bacteriovorus strain Bd10 chromosome, complete genome | blastn | 42291 | 231 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 10039474 | 10039474 | PRJNA515078_P_NODE_17948_length_205_cov_2.392857_g17715_i0 | PRJNA515078 | 17948 | 205 | 2.392857 | 4.90535685 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 209 | 1e-49 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g17715 | i0 | 85.644 | 29.5609756097561 | 202 | 25 | 98 | 4 | 1 | 200 | 1307 | 1506 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 6060 | 209 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 15139053 | 15139053 | PRJNA515078_P_NODE_5752_length_394_cov_1.879552_g5519_i0 | PRJNA515078 | 5752 | 394 | 1.879552 | 7.40543488 | Bdellovibrio | 958 | Bacteria | Bacteria | 231 | 4.509999999999999e-56 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g5519 | i0 | 80.495 | 69.7208121827411 | 323 | 45 | 96 | 9 | 27 | 332 | 1607696 | 1608017 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 27470 | 233 | 0.991416309012876 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 18338496 | 18338496 | PRJNA515078_P_NODE_21335_length_188_cov_1.072848_g21102_i0 | PRJNA515078 | 21335 | 188 | 1.072848 | 2.01695424 | Pigmentibacter sp. JX | 2838411 | Bacteria | Bacteria | 102 | 1.03e-25 | NR | WGL60097.1 | 2976982 | g21102 | i0 | 82.8 | 9.36702127659574 | 58 | 10 | 92.6 | 0 | 186 | 13 | 100 | 157 | WGL60097.1 zinc-binding dehydrogenase [Pigmentibacter sp. JX0631] | diamond | 1761 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Pigmentibacter | Pigmentibacter sp. JX0631 | ||
| 22163684 | 22163684 | PRJNA515078_P_NODE_29698_length_160_cov_1.577236_g29465_i0 | PRJNA515078 | 29698 | 160 | 1.577236 | 2.5235776 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 100 | 2.06e-25 | NR | MCB0368224.1 | 2053517 | g29465 | i0 | 94.2 | 1.95 | 52 | 3 | 97.5 | 0 | 158 | 3 | 6 | 57 | MCB0368224.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] | diamond | 312 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 24712831 | 24712831 | PRJNA515078_P_NODE_11720_length_260_cov_2.798206_g11487_i0 | PRJNA515078 | 11720 | 260 | 2.798206 | 7.2753356 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 364 | 2.679999999999999e-96 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g11487 | i0 | 91.954 | 213.573076923077 | 261 | 20 | 100 | 1 | 1 | 260 | 3447430 | 3447690 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 55529 | 364 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 26665403 | 26665403 | PRJNA515078_P_NODE_13381_length_242_cov_1.136585_g13148_i0 | PRJNA515078 | 13381 | 242 | 1.136585 | 2.7505357 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 80.5 | 5.88e-18 | NR | MCB0370563.1 | 2053517 | g13148 | i0 | 60.3 | 0.71900826446281 | 58 | 23 | 71.9 | 0 | 20 | 193 | 3 | 60 | MCB0370563.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 174 | 80.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27266841 | 27266841 | PRJNA515078_P_NODE_11503_length_263_cov_2.845133_g11270_i0 | PRJNA515078 | 11503 | 263 | 2.845133 | 7.48269979 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 82 | 8.63e-18 | NR | MCB0368029.1 | 2053517 | g11270 | i0 | 58.5 | 1.49429657794677 | 65 | 27 | 74.1 | 0 | 254 | 60 | 60 | 124 | MCB0368029.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 393 | 82 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27298468 | 27298468 | PRJNA515078_P_NODE_17203_length_210_cov_1.867052_g16970_i0 | PRJNA515078 | 17203 | 210 | 1.867052 | 3.9208092 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 43.1 | 0.00286 | NR | MCB0368830.1 | 2053517 | g16970 | i0 | 35.7 | 1 | 70 | 42 | 98.6 | 2 | 209 | 3 | 11 | 78 | MCB0368830.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 210 | 43.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27361864 | 27361864 | PRJNA515078_P_NODE_1503_length_796_cov_12.848485_g1340_i0 | PRJNA515078 | 1503 | 796 | 12.848485 | 102.2739406 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 138 | 1.57e-36 | NR | WP_324955651.1 | 1971216 | g1340 | i0 | 49.6 | 1.64321608040201 | 141 | 67 | 51.6 | 1 | 149 | 559 | 24 | 164 | WP_324955651.1 lipocalin family protein [Oligoflexus sp.] | diamond | 1308 | 138 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 27646068 | 27646068 | PRJNA515078_P_NODE_33424_length_152_cov_1.356522_g33191_i0 | PRJNA515078 | 33424 | 152 | 1.356522 | 2.06191344 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 68.2 | 1.15e-13 | NR | MCK6598877.1 | 2026715 | g33191 | i0 | 69.4 | 0.967105263157895 | 49 | 15 | 96.7 | 0 | 148 | 2 | 2 | 50 | MCK6598877.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 147 | 68.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 28435243 | 28435243 | PRJNA515078_P_NODE_27866_length_165_cov_1.218750_g27633_i0 | PRJNA515078 | 27866 | 165 | 1.21875 | 2.0109375 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 62.8 | 4.79e-10 | NR | MCK6597283.1 | 2026715 | g27633 | i0 | 58.2 | 1 | 55 | 23 | 100 | 0 | 1 | 165 | 82 | 136 | MCK6597283.1 TetR/AcrR family transcriptional regulator [Pseudobdellovibrionaceae bacterium] | diamond | 165 | 62.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 28466929 | 28466929 | PRJNA515078_P_NODE_9186_length_301_cov_1.329545_g8953_i0 | PRJNA515078 | 9186 | 301 | 1.329545 | 4.00193045 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 121 | 6.849999999999998e-30 | NR | MCB0368268.1 | 2053517 | g8953 | i0 | 54.6 | 0.966777408637874 | 97 | 44 | 96.7 | 0 | 8 | 298 | 186 | 282 | MCB0368268.1 DUF4215 domain-containing protein [Bdellovibrionales bacterium] | diamond | 291 | 121 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29445354 | 29445354 | PRJNA515078_P_NODE_2030_length_683_cov_15.956656_g1837_i0 | PRJNA515078 | 2030 | 683 | 15.956656 | 108.98396048 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 70.9 | 4.35e-11 | NR | MCB0369154.1 | 2053517 | g1837 | i0 | 30.7 | 0.601756954612006 | 137 | 89 | 60.2 | 2 | 44 | 454 | 3 | 133 | MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] | diamond | 411 | 70.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29508624 | 29508624 | PRJNA515078_P_NODE_19050_length_199_cov_1.203704_g18817_i0 | PRJNA515078 | 19050 | 199 | 1.203704 | 2.39537096 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 94 | 5.17e-22 | NR | MBX9767865.1 | 2053517 | g18817 | i0 | 56.1 | 0.994974874371859 | 66 | 29 | 99.5 | 0 | 1 | 198 | 107 | 172 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 198 | 94 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29919371 | 29919371 | PRJNA515078_P_NODE_32091_length_155_cov_1.313559_g31858_i0 | PRJNA515078 | 32091 | 155 | 1.313559 | 2.03601645 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 80.1 | 5.64e-16 | NR | RME17908.1 | 28201 | g31858 | i0 | 64.7 | 4.91612903225806 | 51 | 18 | 98.7 | 0 | 2 | 154 | 53 | 103 | RME17908.1 MAG: cystathionine gamma-synthase [Bdellovibrio sp.] | diamond | 762 | 80.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 30803876 | 30803876 | PRJNA515078_P_NODE_5454_length_406_cov_2.314363_g5221_i0 | PRJNA515078 | 5454 | 406 | 2.314363 | 9.39631378 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 107 | 5.810000000000001e-26 | NR | MBX9767865.1 | 2053517 | g5221 | i0 | 47.7 | 1.74384236453202 | 111 | 49 | 75.4 | 1 | 95 | 400 | 1 | 111 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 708 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30898803 | 30898803 | PRJNA515078_P_NODE_29754_length_160_cov_1.268293_g29521_i0 | PRJNA515078 | 29754 | 160 | 1.268293 | 2.0292688 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 74.7 | 4.02e-14 | NR | MBX9702590.1 | 2654442 | g29521 | i0 | 64.7 | 0.95625 | 51 | 18 | 95.6 | 0 | 2 | 154 | 191 | 241 | MBX9702590.1 serine/threonine-protein kinase [Silvanigrellaceae bacterium] | diamond | 153 | 74.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 30898805 | 30898805 | PRJNA515078_P_NODE_31714_length_156_cov_0.983193_g31481_i0 | PRJNA515078 | 31714 | 156 | 0.983193 | 1.53378108 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 84.3 | 1.32e-19 | NR | MBX9704131.1 | 2654442 | g31481 | i0 | 73.1 | 1 | 52 | 14 | 100 | 0 | 1 | 156 | 41 | 92 | MBX9704131.1 DUF4442 domain-containing protein [Silvanigrellaceae bacterium] | diamond | 156 | 84.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 31025135 | 31025135 | PRJNA515078_P_NODE_26115_length_170_cov_1.458647_g25882_i0 | PRJNA515078 | 26115 | 170 | 1.458647 | 2.4796999 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 83.2 | 4.28e-18 | NR | MCB0369154.1 | 2053517 | g25882 | i0 | 69.6 | 0.988235294117647 | 56 | 17 | 98.8 | 0 | 169 | 2 | 77 | 132 | MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] | diamond | 168 | 83.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31246228 | 31246228 | PRJNA515078_P_NODE_11355_length_266_cov_1.183406_g11122_i0 | PRJNA515078 | 11355 | 266 | 1.183406 | 3.14785996 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 73.6 | 2.92e-14 | NR | MCB0368769.1 | 2053517 | g11122 | i0 | 46.9 | 0.913533834586466 | 81 | 43 | 91.4 | 0 | 245 | 3 | 58 | 138 | MCB0368769.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 243 | 73.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31404549 | 31404549 | PRJNA515078_P_NODE_7056_length_351_cov_2.550955_g6823_i0 | PRJNA515078 | 7056 | 351 | 2.550955 | 8.95385205 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 125 | 1.21e-33 | NR | MBX9767865.1 | 2053517 | g6823 | i0 | 60.9 | 0.786324786324786 | 92 | 36 | 78.6 | 0 | 2 | 277 | 110 | 201 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 276 | 125 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31435963 | 31435963 | PRJNA515078_P_NODE_696_length_1139_cov_6.500000_g599_i0 | PRJNA515078 | 696 | 1139 | 6.5 | 74.035 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 351 | 1.63e-115 | NR | MCB0386755.1 | 2053517 | g599 | i0 | 50.8 | 0.93766461808604 | 356 | 158 | 90.1 | 9 | 1039 | 14 | 27 | 379 | MCB0386755.1 C1 family peptidase [Bdellovibrionales bacterium] | diamond | 1068 | 351 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31657259 | 31657259 | PRJNA515078_P_NODE_6917_length_355_cov_2.515723_g6684_i0 | PRJNA515078 | 6917 | 355 | 2.515723 | 8.93081665 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 71.6 | 1.09e-12 | NR | MCB0371038.1 | 2053517 | g6684 | i0 | 41.9 | 0.523943661971831 | 62 | 36 | 52.4 | 0 | 12 | 197 | 122 | 183 | MCB0371038.1 cation transporting ATPase C-terminal domain-containing protein [Bdellovibrionales bacterium] | diamond | 186 | 71.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31752219 | 31752219 | PRJNA515078_P_NODE_5937_length_388_cov_1.333333_g5704_i0 | PRJNA515078 | 5937 | 388 | 1.333333 | 5.17333204 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 88.2 | 7.01e-20 | NR | MBC7712185.1 | 2608087 | g5704 | i0 | 53.1 | 0.742268041237113 | 96 | 44 | 73.5 | 1 | 42 | 326 | 2 | 97 | MBC7712185.1 hypothetical protein [Bacteriovorax sp.] | diamond | 288 | 88.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. | ||
| 31910506 | 31910506 | PRJNA515078_P_NODE_33117_length_153_cov_1.008621_g32884_i0 | PRJNA515078 | 33117 | 153 | 1.008621 | 1.54319013 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 44.7 | 0.00226 | NR | WP_374033313.1 | 959 | g32884 | i0 | 50 | 0.784313725490196 | 40 | 20 | 78.4 | 0 | 2 | 121 | 352 | 391 | WP_374033313.1 RCC1 domain-containing protein [Bdellovibrio bacteriovorus] | diamond | 120 | 44.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 32227070 | 32227070 | PRJNA515078_P_NODE_1858_length_715_cov_4.864307_g1677_i0 | PRJNA515078 | 1858 | 715 | 4.864307 | 34.77979505 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 73.6 | 5.37e-12 | NR | MCB0369154.1 | 2053517 | g1677 | i0 | 30.2 | 2.0013986013986 | 139 | 89 | 57.5 | 3 | 672 | 262 | 1 | 133 | MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] | diamond | 1431 | 73.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;